Sequence of DPV Groundnut bud necrosis virus

Groundnut bud necrosis virus isolate GBNV_Pea_USN nucleocapsid protein (NP) gene, complete cds.

ACC No: JF281103

Dated: 2011-05-09 | Length: 831 | CRC: -581976971

                
ID   JF281103; SV 1; linear; genomic RNA; STD; VRL; 831 BP.
XX
AC   JF281103;
XX
DT   09-MAY-2011 (Rel. 108, Created)
DT   09-MAY-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Groundnut bud necrosis virus isolate GBNV_Pea_USN nucleocapsid protein (NP)
DE   gene, complete cds.
XX
KW   .
XX
OS   Groundnut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN   [1]
RP   1-831
RA   Akram M., Naimuddin;
RT   "Sequence variability in NP and NSm genes of GBNV isolates causing tip
RT   necrosis in pea";
RL   Unpublished.
XX
RN   [2]
RP   1-831
RA   Akram M., Naimuddin;
RT   ;
RL   Submitted (01-FEB-2011) to the EMBL/GenBank/DDBJ databases.
RL   Crop Protection, Indian Institute of Pulses Research, Kalyanpur, Kanpur, UP
RL   208024, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Groundnut bud necrosis virus"
FT                   /host="Pisum sativum (pea)"
FT                   /isolate="GBNV_Pea_USN"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Udham Singh Nagar District of Uttarakhand"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:198612"
FT   gene            1. .831
FT                   /gene="NP"
FT   CDS             1. .831
FT                   /codon_start=1
FT                   /gene="NP"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AEE00187.1"
FT                   /translation="MSNVKQLTEKKIKELLAGGSADVEIETEDSTPGFSFKAFYDANKT
FT                   LEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM
FT                   ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSPKAGPSLEL"
XX
SQ   Sequence 831 BP; 273 A; 145 C; 178 G; 235 T; 0 other;

jf281103 Length: 831  09-MAY-2011  Type: N  Check: 2205  ..

       1  atgtctaacg tcaagcaact gaccgagaag aaaatcaaag aacttttggc
      51  tggtggctct gcggatgttg aaattgaaac agaagattcc actcccggat
     101  ttagctttaa agctttctat gacgctaaca aaactcttga aataactttc
     151  acaaactgtt tgaatatctt gaagtgcagg aagcagatct ttgctgcttg
     201  caaaagtggt aagtatgttt tttgtggtaa aactattgtt gctacaaata
     251  ctgacgtagg gccagatgac tggaccttca aaaggacaga agctttcatc
     301  aggaccaaaa tggctagtat ggttgaaaag agcaagaatg atgctgctaa
     351  gcaggagatg tacaataaaa taatggaatt accattagtg gcagcttatg
     401  gattaaatgt ccctgcatct ttcgatacat gtgctttaag gatgatgctc
     451  tgcattggag gtcctctgcc tctcttgtct agcatgacag gtctggcacc
     501  aattatattc cctctggctt attatcaaaa tgtgaagaaa gagaaattag
     551  gaattaagaa cttttctact tatgaacagg tttgcaaagt agccaaagtg
     601  ctttctgctt cacagattga atttaaaaat gaactagagg aaatgtttaa
     651  atcagctgta aagctattga gtgagagcaa ccccggaaca gccagctcta
     701  tctcactcaa gaaatatgat gaacaagtca aatatatgga caaagctttc
     751  agtgccagtc tttcaatgga tgattatggt gaacattcta agaaaaagag
     801  tccaaaggct ggtccttcgc tggaattgta a