Sequence of DPV Groundnut bud necrosis virus

Groundnut bud necrosis virus isolate GBNV_Pea_BRY nonstructural movement protein (NSm) gene, complete cds.

ACC No: JF281105

Dated: 2011-05-09 | Length: 924 | CRC: 129267135

                
ID   JF281105; SV 1; linear; genomic RNA; STD; VRL; 924 BP.
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AC   JF281105;
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DT   09-MAY-2011 (Rel. 108, Created)
DT   09-MAY-2011 (Rel. 108, Last updated, Version 1)
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DE   Groundnut bud necrosis virus isolate GBNV_Pea_BRY nonstructural movement
DE   protein (NSm) gene, complete cds.
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KW   .
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OS   Groundnut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-924
RA   Akram M., Naimuddin;
RT   "Sequence variability in NP and NSm genes of GBNV isolates causing tip
RT   necrosis in pea";
RL   Unpublished.
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RN   [2]
RP   1-924
RA   Akram M., Naimuddin;
RT   ;
RL   Submitted (02-FEB-2011) to the EMBL/GenBank/DDBJ databases.
RL   Crop Protection, Indian Institute of Pulses Research, Kalyanpur, Kanpur, UP
RL   208024, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .924
FT                   /organism="Groundnut bud necrosis virus"
FT                   /host="Pisum sativum (pea)"
FT                   /isolate="GBNV_Pea_BRY"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Bareilly District of Uttar Pradesh"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:198612"
FT   gene            1. .924
FT                   /gene="NSm"
FT   CDS             1. .924
FT                   /codon_start=1
FT                   /gene="NSm"
FT                   /product="nonstructural movement protein"
FT                   /protein_id="AEE00189.1"
FT                   /translation="MSRLSNVLESFRPSNSSNKELVPAVKKENNRSILARNVSKKDVDS
FT                   AIMNKAKTLNGKQYVSSGDSSVLGTYSSESAVEATSDDILSRLVVEQSTHLSNWKNDSL
FT                   VGNGNDKVSFTISIMPTWNSNRRYMHISRLIIWVVPTIPDSKNNVKASLIDPNKMTKEE
FT                   KIIISRQASLKDPMCFIFHLNWSFPKERNTPKQCMQLNLTSDEKYAKGVSFASVMYSWV
FT                   KNFCDTPIAAENNTCDVVPINRAKVIQSAALIEACKLMIPKGTGGKQISNQIKNLQKAA
FT                   ERLALEAENDDESLDVDIEMDNLLEI"
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SQ   Sequence 924 BP; 330 A; 167 C; 180 G; 247 T; 0 other;

jf281105 Length: 924  09-MAY-2011  Type: N  Check: 4731  ..

       1  atgtctcgct tgtctaacgt cttagaatct ttccgtcctt caaacagctc
      51  aaacaaagag ctagtgcctg cagttaaaaa ggaaaacaac agaagcattt
     101  tggcaagaaa tgtttccaaa aaagatgttg acagtgctat catgaacaaa
     151  gcaaaaacat tgaatgggaa acagtatgtt tctagtggag attccagtgt
     201  actgggcaca tactctagtg agtcagctgt agaagctact tctgatgata
     251  ttctgtccag gcttgttgtt gagcaaagta ctcacctaag taactggaaa
     301  aatgattcac ttgtaggcaa tggaaatgac aaagttagct ttaccataag
     351  cataatgcct acatggaaca gtaacaggag gtatatgcat atatcaaggc
     401  tcataatctg ggttgtgcca actatccctg attcaaaaaa caatgtcaaa
     451  gcctccttaa ttgatccaaa caaaatgact aaagaggaga agataattat
     501  cagcagacaa gcctcattaa aggatcctat gtgttttatt ttccatctaa
     551  attggtcatt cccaaaagag agaaatactc caaaacaatg catgcagctc
     601  aatttaacca gtgatgaaaa atatgccaaa ggagtcagct ttgcttcagt
     651  catgtattca tgggttaaaa acttctgcga tactcctata gctgctgaaa
     701  ataacacatg tgatgtagtt cccattaaca gagccaaggt cattcaatct
     751  gctgctctaa ttgaagcatg caaattaatg atacctaaag gaactggtgg
     801  gaaacagata tccaatcaaa tcaagaatct gcagaaagct gctgaaaggc
     851  tagcattaga agctgaaaat gatgatgaga gcctagatgt tgatattgag
     901  atggataatc ttcttgaaat ataa