Sequence of DPV Passiflora foetida virus Y

Passiflora virus Y isolate BrmP-2 coat protein gene, partial cds.

ACC No: JF427615

Dated: 2011-10-06 | Length: 819 | CRC: -1932955299

                
ID   JF427615; SV 1; linear; viral cRNA; STD; VRL; 819 BP.
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AC   JF427615;
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DT   19-SEP-2011 (Rel. 110, Created)
DT   06-OCT-2011 (Rel. 110, Last updated, Version 2)
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DE   Passiflora virus Y isolate BrmP-2 coat protein gene, partial cds.
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KW   .
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OS   Passiflora virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-819
RX   PUBMED; 21744001.
RA   Coutts B.A., Kehoe M.A., Webster C.G., Wylie S.J., Jones R.A.;
RT   "Indigenous and introduced potyviruses of legumes and Passiflora spp. from
RT   Australia: biological properties and comparison of coat protein nucleotide
RT   sequences";
RL   Arch. Virol. 156(10):1757-1774(2011).
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RN   [2]
RP   1-819
RA   Coutts B.A., Kehoe M.A., Webster C.G., Wylie S.J., Jones R.A.C.;
RT   ;
RL   Submitted (09-FEB-2011) to the INSDC.
RL   Plant Virology, Department of Agriculture and Food-Western Australia, 3
RL   Baron-Hay Court, South Perth, Western Australia 6151, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .819
FT                   /organism="Passiflora virus Y"
FT                   /host="Macroptilium atropurpureum"
FT                   /isolate="BrmP-2"
FT                   /mol_type="viral cRNA"
FT                   /country="Australia:Broome, Western Australia"
FT                   /collected_by="Adrian Gibbs"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:263363"
FT   CDS             <1. .>819
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ADZ45595.1"
FT                   /translation="SSSKKDEAIDAGADKQAKSGNQRSTGQEGISGTKDKDKDINAGTQ
FT                   GKVVPRLQKITKNMRLPMVKGNVILDIGHLLDYKPAQTDLFNTRATKAQFEMWYEAVKK
FT                   EYELDDSQMAVVMNGFMVWCIDNGTSPDINGVWVMMDGDEQIEYPLKPMVENAKPTLRQ
FT                   IMHHFSDAAEAYIEMRNSEAPYMPRYGLLRNLRDRSLARYAFDFYEVNSKTSERAREAV
FT                   AQMKAAALSNVNTRLFGLDGNVATATEDTERHTARDVSRNMHTLLGMNSMQ"
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SQ   Sequence 819 BP; 278 A; 148 C; 213 G; 180 T; 0 other;

jf427615 Length: 819  06-OCT-2011  Type: N  Check: 6294  ..

       1  tcgtcaagta agaaggatga agctattgat gcaggagctg acaaacaagc
      51  aaagagtgga aatcagagga gcacagggca agagggcatt agcgggacga
     101  aggataagga caaggacatt aatgccggca cacaaggtaa agtcgtccca
     151  aggctacaga agataacaaa gaacatgaga ttgcctatgg taaaaggaaa
     201  cgttattctc gacattggtc atctactgga ctataagcct gctcaaacag
     251  atctcttcaa cacaagagcc acaaaagcac agtttgaaat gtggtatgaa
     301  gcagtgaaga aagagtatga gcttgatgat tcccaaatgg ctgtggtaat
     351  gaatggattt atggtctggt gtattgacaa tggaacatcg ccagacataa
     401  atggggtttg ggtcatgatg gatggagatg agcaaattga atatcctttg
     451  aaaccaatgg ttgagaatgc aaaaccaaca ttgaggcaaa tcatgcatca
     501  cttctcggac gcagctgaag cgtacatcga gatgagaaac agtgaagcac
     551  cgtatatgcc tagatacgga ctgcttagga atttacgaga tcggagtctt
     601  gccagatatg cttttgattt ttacgaagtc aattctaaga cttctgaaag
     651  agcacgggaa gccgtggctc aaatgaaggc agccgctctc agcaacgtga
     701  acactagatt gtttggatta gatggaaacg ttgcaacagc aactgaggac
     751  actgaaaggc atactgctag ggatgtcagt cgaaacatgc acacactctt
     801  agggatgaat tccatgcag