Sequence of DPV Zucchini yellow mosaic virus

Zucchini yellow mosaic virus isolate Knx-1 coat protein gene, partial cds.

ACC No: JF792363

Dated: 2011-10-18 | Length: 837 | CRC: -355100599

                
ID   JF792363; SV 1; linear; genomic RNA; STD; VRL; 837 BP.
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AC   JF792363;
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DT   18-OCT-2011 (Rel. 110, Created)
DT   18-OCT-2011 (Rel. 110, Last updated, Version 1)
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DE   Zucchini yellow mosaic virus isolate Knx-1 coat protein gene, partial cds.
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KW   .
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OS   Zucchini yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-837
RX   PUBMED; 21935626.
RA   Coutts B.A., Kehoe M.A., Webster C.G., Wylie S.J., Jones R.A.;
RT   "Zucchini yellow mosaic virus: biological properties, detection procedures
RT   and comparison of coat protein gene sequences";
RL   Arch. Virol. 0:0-0(2011).
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RN   [2]
RP   1-837
RA   Coutts B.A., Kehoe M.A., Webster C.G., Wylie S.J., Jones R.A.;
RT   ;
RL   Submitted (08-APR-2011) to the INSDC.
RL   Plant Virology, Department of Agriculture and Food Western Australia, 3
RL   Baron-Hay Court, South Perth, WA 6151, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .837
FT                   /organism="Zucchini yellow mosaic virus"
FT                   /host="Cucurbita moschata"
FT                   /isolate="Knx-1"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia:Kununurra, WA"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:12232"
FT   CDS             <1. .>837
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AEQ38903.1"
FT                   /translation="SDTQTKEADAGATKKDKDEDKDKKKDVASSSTGVKTVAAVTKDKD
FT                   VNAGSHGKIVPRLSKITKKMSLPKVKGSVILNIDHLLEYKPDQIELYNTRASHQQFASW
FT                   FNQVKAEYDLDDQQMGVVMNGFMVWCIENGTSPDINGVWVMMDGDEQVEYPLKPIVENA
FT                   KPTLRQIMHHFSDAAEAYIEMRNAEAPYMPRYGLLRNLRDRSLARYAFDFYEVNSKTPD
FT                   RAREAVAQMKAAALSNVSSRLFGLDGNVATTSEDTERHTARDVNRNMHTLLGVNTMQ"
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SQ   Sequence 837 BP; 269 A; 161 C; 220 G; 187 T; 0 other;

jf792363 Length: 837  18-OCT-2011  Type: N  Check: 6052  ..

       1  tcagacaccc aaacaaaaga agcagacgct ggggccacga agaaagacaa
      51  ggatgaagac aaggataaaa agaaggatgt tgcaagttcc agcactggcg
     101  tgaaaacagt cgcagctgtc acgaaggata aagatgtgaa cgctggttcg
     151  catgggaaaa tagttccgcg cctgtcaaag atcacgaaga aaatgtcatt
     201  accaaaggtg aaggggagcg taatacttaa cattgatcac ttgctggagt
     251  ataagccgga ccagattgag ttgtacaaca cacgagcatc acatcaacaa
     301  tttgcctcct ggtttaacca agttaaggcg gaatatgatt tggatgatca
     351  acaaatggga gttgttatga atggctttat ggtgtggtgc atagagaatg
     401  gcacgtcgcc tgacattaat ggagtgtggg ttatgatgga tggagatgag
     451  caagttgaat atcctctgaa accgatagtc gagaacgcaa agccaacgct
     501  gcgacaaata atgcatcact tctcagatgc agcggaggct tatatagaga
     551  tgagaaacgc agaggcacca tatatgccga ggtatggttt gcttcgaaat
     601  ctgcgggata ggagtttggc ccgttacgct ttcgactttt acgaagtcaa
     651  ttcaaagact cctgatagag cccgcgaagc tgttgcacag atgaaagcag
     701  cagctttaag caatgtttca tcgaggttgt ttggtctcga tggaaatgtt
     751  gctacaacta gcgaagacac tgaacggcac actgcacgtg atgttaacag
     801  aaacatgcac accttactag gtgtgaacac aatgcag