Sequence of DPV Potato virus Y
Potato virus Y isolate Cou8/03 polyprotein gene, partial cds.
ACC No: JF804780
Dated: 2011-09-26 | Length: 1582 | CRC: 440456080
ID JF804780; SV 1; linear; genomic RNA; STD; VRL; 1582 BP.
XX
AC JF804780;
XX
DT 26-SEP-2011 (Rel. 110, Created)
DT 26-SEP-2011 (Rel. 110, Last updated, Version 1)
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DE Potato virus Y isolate Cou8/03 polyprotein gene, partial cds.
XX
KW .
XX
OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1582
RA Golnik K., Szyndel M.S.;
RT "Estimation of diversification among strains of Potato virus Y";
RL Unpublished.
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RN [2]
RP 1-1582
RA Golnik K., Szyndel M.S.;
RT ;
RL Submitted (13-APR-2011) to the INSDC.
RL Department of Plant Pathology, Warsaw University of Life Sciences,
RL Nowoursynowska 159, Warsaw 02-787, Poland
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FH Key Location/Qualifiers
FH
FT source 1. .1582
FT /organism="Potato virus Y"
FT /host="potato"
FT /strain="NTN"
FT /isolate="Cou8/03"
FT /serotype="N"
FT /mol_type="genomic RNA"
FT /country="Poland"
FT /collected_by="Chrzanowska"
FT /collection_date="2003"
FT /db_xref="taxon:12216"
FT CDS <1. .1298
FT /codon_start=3
FT /product="polyprotein"
FT /note="contains coat protein"
FT /protein_id="AEO98476.1"
FT /translation="IAVNPEKESILDRMSQHFSDLGLNYDFSSRTRKKEELWFMSHRGL
FT LIEGMYVPKLEEERIVSILQWDRADLPEHRLEAICAAMIESWGYFELTHQIRRFYSWLL
FT QQQPFSTIAQEGKAPYIASMALKKLYMNRTVDEEELKAFTEMMVALDDELECDTYEVHH
FT QGNDTIDAGGSTKKDAKQEQGSIQPNLNKEKEKDVNVGTSGTHTVPRIKAITSKMRMPK
FT SKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVQLAYDIGETEMPTVMNGLMV
FT WCIENGTSPNINGVWVMMDGDEQVEYPLKPIVENAKPTLRQIMAHFSDVAEAYIEMRNK
FT KEPYMPRYGLXRNLRDGSLARYAFDFYEVTSRTPVRAREAHIQMKAAALKSAQSRLFGL
FT DGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
XX
SQ Sequence 1582 BP; 501 A; 283 C; 383 G; 414 T; 1 other;
jf804780 Length: 1582 26-SEP-2011 Type: N Check: 2615 ..
1 tgattgctgt gaatccggag aaagagagca ttctcgatag aatgtcacaa
51 catttctcag atcttggttt gaactatgat ttttcgtcga gaacaagaaa
101 gaaggaggaa ttgtggttca tgtcccatag aggcctgcta atcgagggta
151 tgtacgtgcc aaagcttgaa gaagagagaa ttgtatccat tttgcaatgg
201 gatagagctg atctgccaga gcacagatta gaagcgattt gtgcagcaat
251 gatagaatcc tggggttatt ttgagttaac gcaccaaatc aggagattct
301 actcatggtt gttgcaacag caaccttttt caacgatagc acaggaagga
351 aaagctccat acatagcgag catggcattg aagaagctgt acatgaatag
401 gacagtagat gaggaggaac tgaaagcttt cactgaaatg atggttgcct
451 tggatgatga acttgagtgc gatacttatg aagtgcacca tcaaggaaat
501 gacacaatcg atgcaggagg aagcactaag aaggatgcaa aacaagagca
551 aggtagcatt caaccaaatc tcaacaagga aaaggaaaag gacgtgaatg
601 ttggaacatc tggaactcat actgtgccac gaattaaagc tatcacgtcc
651 aaaatgagaa tgcccaagag taaaggtgca actgtactaa atttggaaca
701 cttactcgag tatgctccac agcaaattga catctcaaat actcgagcaa
751 ctcaatcaca gtttgatacg tggtatgaag cggtacaact tgcatacgac
801 ataggagaaa ctgaaatgcc aactgtgatg aatgggctta tggtttggtg
851 cattgaaaat ggaacctcgc caaacatcaa cggagtttgg gttatgatgg
901 atggagatga acaagtcgaa tacccactga aaccaatcgt tgagaatgca
951 aaaccaacac ttaggcaaat catggcacat ttctcagatg ttgcagaagc
1001 gtatatagaa atgcgcaaca aaaaggaacc atatatgcca cgatatggtt
1051 tanttcgtaa tctgcgcgat ggaagtttgg ctcgctatgc ttttgacttt
1101 tatgaggtca catcacgaac accagtgagg gctagggaag cgcacattca
1151 aatgaaggcc gcagcattga aatcagccca atctcgactt ttcgggttgg
1201 acggtggcat cagtacacaa gaggagaaca cagagaggca caccaccgag
1251 gatgtctctc caagtatgca tactctactt ggagtcaaga acatgtgatg
1301 tagtgtctct ccggacgata tataagtatt tacatatgca gtaagtattt
1351 tggcttttcc tgtactactt ttatcataat taataatcag tttgaatatt
1401 actaatagat agaggtggca gggtgatttc gtcattgtgg tgactctatc
1451 ttttaattcc gcattattaa gtcttagata aaagtgccgg gttgtcgttg
1501 ttgtggatga ttcatcgatt aggtgatgtt gcgattctgt cgtagcagtg
1551 actatgtctg gatctatctg cttgggtggt gt