Sequence of DPV Potato virus Y

Potato virus Y isolate New Zealand-N polyprotein gene, partial cds.

ACC No: JF804789

Dated: 2011-09-26 | Length: 802 | CRC: -1671469108

                
ID   JF804789; SV 1; linear; genomic RNA; STD; VRL; 802 BP.
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AC   JF804789;
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DT   26-SEP-2011 (Rel. 110, Created)
DT   26-SEP-2011 (Rel. 110, Last updated, Version 1)
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DE   Potato virus Y isolate New Zealand-N polyprotein gene, partial cds.
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KW   .
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OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-802
RA   Golnik K., Szyndel M.S.;
RT   "Estimation of diversification among strains of Potato virus Y";
RL   Unpublished.
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RN   [2]
RP   1-802
RA   Golnik K., Szyndel M.S.;
RT   ;
RL   Submitted (13-APR-2011) to the INSDC.
RL   Department of Plant Pathology, Warsaw University of Life Sciences,
RL   Nowoursynowska 159, Warsaw 02-787, Poland
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FH   Key             Location/Qualifiers
FH
FT   source          1. .802
FT                   /organism="Potato virus Y"
FT                   /host="potato"
FT                   /strain="N"
FT                   /isolate="New Zealand-N"
FT                   /serotype="N"
FT                   /mol_type="genomic RNA"
FT                   /country="New Zealand"
FT                   /collected_by="Chrzanowska"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .>802
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="AEO98485.1"
FT                   /translation="TVSHQGKNKSKRIQALKFRHARDKRAGFEIDNNDDTIEEFFGSAY
FT                   RKKGKGKGTTVGMGKSSRRFVNMYGFDPTEYSFIQFVDPLTGAQIEENVYADIRDIQER
FT                   FSDVRKKMVEDDEIELQALGSNTTIHAYFRKDWSDKALKIDLMPHNPLKICDKSNGIAK
FT                   FPERELELRQTGPAIEVDVKDIPKQEVEHEAKSLMRGLRDFNPIAQTVCRVKVSVEHGT
FT                   SEMYGFGFGAYIIVNHHLFKSFNGSMEVRSMHGTFRVKNLHSLSV"
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SQ   Sequence 802 BP; 268 A; 139 C; 192 G; 203 T; 0 other;

jf804789 Length: 802  26-SEP-2011  Type: N  Check: 7079  ..

       1  actgtgtctc accagggcaa gaacaaatcc aaaagaattc aagcattgaa
      51  gtttcgacac gcccgcgata agagggctgg ctttgaaatt gataacaatg
     101  atgatacaat agaagaattc tttggatctg catacaggaa gaagggaaaa
     151  ggtaaaggca ccactgttgg tatgggcaag tcaagcagga ggtttgttaa
     201  tatgtatgga tttgacccaa cagaatattc attcatccag ttcgttgatc
     251  cgctcactgg agctcaaatt gaagagaacg tctatgctga tattagagac
     301  atccaagagc gctttagtga tgtccgcaag aaaatggtag aggatgatga
     351  aatcgaattg caagcattgg gcagcaacac aaccattcat gcttacttca
     401  ggaaagattg gtctgacaag gctctaaaaa ttgatttgat gccacacaac
     451  ccactcaaaa tctgtgataa atcgaatggc attgctaagt ttcctgaaag
     501  agaacttgag ttgaggcaaa ctgggccagc aatagaggtt gatgtgaaag
     551  acattccaaa acaggaagtg gagcatgaag ccaaatcact catgagaggt
     601  ttaagggatt tcaatccaat tgctcaaaca gtttgcagag taaaagtgtc
     651  tgttgaacat ggaacgtctg aaatgtatgg gttcggtttt ggtgcgtata
     701  ttatagtaaa ccaccatcta ttcaagagct tcaatggatc catggaagtg
     751  cgatcaatgc atggaacatt cagagtgaag aatttgcata gcttgagcgt
     801  tt