Sequence of DPV Potato virus Y
Potato virus Y isolate YC Zb polyprotein gene, partial cds.
ACC No: JF804797
Dated: 2011-09-26 | Length: 1496 | CRC: -1071858518
ID JF804797; SV 1; linear; genomic RNA; STD; VRL; 1496 BP.
XX
AC JF804797;
XX
DT 26-SEP-2011 (Rel. 110, Created)
DT 26-SEP-2011 (Rel. 110, Last updated, Version 1)
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DE Potato virus Y isolate YC Zb polyprotein gene, partial cds.
XX
KW .
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OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1496
RA Golnik K., Szyndel M.S.;
RT "Estimation of diversification among strains of Potato virus Y";
RL Unpublished.
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RN [2]
RP 1-1496
RA Golnik K., Szyndel M.S.;
RT ;
RL Submitted (13-APR-2011) to the INSDC.
RL Department of Plant Pathology, Warsaw University of Life Sciences,
RL Nowoursynowska 159, Warsaw 02-787, Poland
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FH Key Location/Qualifiers
FH
FT source 1. .1496
FT /organism="Potato virus Y"
FT /host="potato"
FT /strain="C"
FT /isolate="YC Zb"
FT /serotype="O/C"
FT /mol_type="genomic RNA"
FT /collected_by="Chrzanowska"
FT /db_xref="taxon:12216"
FT CDS <1. .>1496
FT /codon_start=2
FT /product="polyprotein"
FT /note="contains genome-linked protein (VPg)"
FT /protein_id="AEO98493.1"
FT /translation="LRDCMTPLCDQSIPYRASSTWLSVGEYERLGVVLDIPNQVKIAFH
FT VKEIPPKLHEMLWETVVKYKDVCLFPSIRASSISKIAYTLRTDLFAXPRTLILVERLLE
FT EERVKQSQFRSLIDEGCSSMFSIVNLTNTLRARYAKDYTAENIQKLEKVRSQLKEFSNL
FT DGSACEENLMRRYESLQFVHHQATTSLAKDLKLKGVWKKSLVAKDLIIAGAIAIGGIGL
FT IYSWFTQSVETVHHQGKNKSKRIQALKFRHARDKRAGFEIDNNDDTIEEFFGSAYRKKG
FT KGKGTTVGMGKSSRRFINMYGFDPTEYSFIQFVDPLTGAQIEENVYADIRDIQERFSEV
FT RKKMVEDDEIEMQALGSNTSIHAYFRKDWSDKALKIDLMPHNPLKICDKTNGIAKFPER
FT EFELRQTGPAVEVDVKDIPKQEVEHEAKSLMRGLRDFNPIAQTVCRLKVSVEFGTSEVY
FT GFGFGAYIVANHHLFKSYNGSMEVRSMHGTFRVKNLHSLS"
XX
SQ Sequence 1496 BP; 487 A; 267 C; 361 G; 380 T; 1 other;
jf804797 Length: 1496 26-SEP-2011 Type: N Check: 6208 ..
1 acttcgagac tgtatgacac ctctgtgcga tcagtctata ccgtacaggg
51 cctcgagtac ttggttgtca gtgggtgaat atgagcgact tggagtggtt
101 ttggacattc caaatcaagt caaaattgca tttcatgtca aagaaattcc
151 tcctaagctt cacgaaatgt tgtgggaaac ggtggttaag tacaaagacg
201 tttgtttgtt cccaagcatt cgagcatctt ctatcagcaa aatcgcatat
251 acattgcgca cagatctttt tgctntccca agaactctaa tattggtgga
301 gaggttactt gaagaggagc gagtgaagca aagccaattc agaagtctta
351 ttgatgaagg atgttcaagc atgttctcaa ttgtcaactt gaccaacact
401 cttagagcta gatatgcaaa ggactacacc gcagagaaca tacagaaact
451 cgagaaagtg agaagtcaat tgaaagaatt ctcaaactta gatggctctg
501 catgtgagga aaatttaatg aggaggtatg agtctttgca gtttgttcac
551 caccaagcca cgacgtcact tgcaaaggac cttaagctaa agggagtttg
601 gaagaagtcg ctagtggcta aagacttgat catagcaggc gccattgcaa
651 ttggtggaat agggctcata tatagttggt tcacacaatc agttgaaact
701 gtgcatcacc aagggaaaaa caaatccaaa agaatccaag ctttaaagtt
751 tcgccacgct cgcgacaaaa gggctggctt cgaaattgac aacaatgatg
801 acacaataga ggaattcttt ggatctgcat acaggaagaa agggaaaggt
851 aaaggtacca cagttggcat gggcaagtca agtaggaggt tcatcaacat
901 gtatggattt gatccaacag agtactcatt catccaattc gttgatccac
951 tcactggggc acaaatagaa gagaatgtct atgctgacat tagagatatt
1001 caagaaagat ttagtgaagt gcgaaagaag atggttgagg atgacgaaat
1051 agaaatgcaa gccttgggta gtaacacgag catacatgcc tacttcagga
1101 aagattggtc tgacaaagct ttgaagatcg acttaatgcc acataaccca
1151 cttaagattt gtgataaaac aaatggcatt gccaaatttc ctgagagaga
1201 gtttgaacta aggcagactg gaccagctgt agaagtcgat gtgaaggaca
1251 taccaaaaca ggaggtagag catgaagcta aatcgctcat gagaggttta
1301 agagatttca atccaattgc ccaaacagtt tgtaggttga aagtatctgt
1351 tgagtttgga acgtcagagg tgtatggttt tgggtttggg gcatacattg
1401 tagcaaatca ccatttgttc aagagctaca atggttcaat ggaagtgcgc
1451 tctatgcatg gcacattcag ggtgaagaac ctacacagtt tgagtg