Sequence of DPV Potato virus Y

Potato virus Y isolate YO Epo polyprotein gene, partial cds.

ACC No: JF804799

Dated: 2011-09-26 | Length: 1517 | CRC: -272228431

                
ID   JF804799; SV 1; linear; genomic RNA; STD; VRL; 1517 BP.
XX
AC   JF804799;
XX
DT   26-SEP-2011 (Rel. 110, Created)
DT   26-SEP-2011 (Rel. 110, Last updated, Version 1)
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DE   Potato virus Y isolate YO Epo polyprotein gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1517
RA   Golnik K., Szyndel M.S.;
RT   "Estimation of diversification among strains of Potato virus Y";
RL   Unpublished.
XX
RN   [2]
RP   1-1517
RA   Golnik K., Szyndel M.S.;
RT   ;
RL   Submitted (13-APR-2011) to the INSDC.
RL   Department of Plant Pathology, Warsaw University of Life Sciences,
RL   Nowoursynowska 159, Warsaw 02-787, Poland
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1517
FT                   /organism="Potato virus Y"
FT                   /host="potato"
FT                   /strain="O"
FT                   /isolate="YO Epo"
FT                   /serotype="O"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /collected_by="Chrzanowska"
FT                   /collection_date="1963"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .>1517
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /note="contains genome-linked protein (VPg)"
FT                   /protein_id="AEO98495.1"
FT                   /translation="LRDCMTPLCDQSIPYRASSTWLSVSEYERLGVALEIPKQIKIAFH
FT                   IKEIPPKLHEMLWETVVKYKDVCLFPSIRASSISKIAYTLRTDLFAIPRTLILVERLLE
FT                   EERVKQSQFRSLIDEGCSSMFSIVNLTNTLRARYAKDYTAENIQKLEKVRSQLKEFSNL
FT                   DGSACEENLIKRYESLQFVHHQAATSLAKDLKLKGTWKKSLVAKDLIIAGAVAIGGIGL
FT                   IYSWFTQSVETVSHQGKNKSKRIQALKFRHARDKRAGFEIDNNDDTIEEFFGSAYRKKG
FT                   KGKGTTVGMGKSSRRFINMYGFDPTEYSFIQFVDPLTGAQIEENVYADIRDIQERFSEV
FT                   RKKMVENDDIEMQALGSNTTIHAYFRKDWSDKALKIDLMPHNPLKICDKTNGIAKFPER
FT                   ELELRQTGPAVEVEVKDIPTQEVEHEAKSLMRGLRDFNPIAQTVCRLKVSVEYGTSEMY
FT                   GFGFGAYIIANHHLFRSYNGSMEVRSMHGTFRVKNLHSLSVLPIKGR"
XX
SQ   Sequence 1517 BP; 502 A; 272 C; 360 G; 382 T; 1 other;

jf804799 Length: 1517  26-SEP-2011  Type: N  Check: 6461  ..

       1  aacttcgaga ttgtatgaca cctttgtgcg atcagtctat accatacagg
      51  gcatcgagca cttggttatc ggtcagtgaa tatgagcgac ttggagtggc
     101  cttagaaatt ccaaagcaaa tcaaaattgc attccatatc aaagagattc
     151  ctcctaagct ccacgaaatg ctttgggaaa cggttgtcaa atacaaagac
     201  gtttgcttat ttccaagcat tcgagcatcg tccatcagca aaatcgcata
     251  cacattgcgt acagacctct ttgccatccc aagaactcta atattggtgg
     301  agagattgct tgaagaggag cgagtgaagc agagccaatt tagaagtctc
     351  atcgatgaag ggtgctcaag catgttttca attgtcaact tgacaaacac
     401  tctcagagct agatatgcaa aagattacac cgcagagaac atacaaaaac
     451  ttgagaaagt gagaagtcaa ttgaaagaat tctcaaattt ggatggttct
     501  gcatgtgagg aaaatttaat aaagaggtat gagtctttgc agttcgttca
     551  tcaccaagct gcgacgtcac ttgcaaagga tctcaagttg aaggggactt
     601  ggaagaagtc attagtggcc aaagacttga ttatagcagg cgctgttgca
     651  attggtggaa taggacttat atatagttgg tttacacaat cagttgagac
     701  tgtgtctcat caagggaaaa ataaatccaa aagaattcaa gccttaaagt
     751  ttcgccatgc tcgtgacaaa agggctggct ttgaaattga caacaatgat
     801  gacacaatag aggaattctt tggatctgca tacaggaaaa agggaaaagg
     851  taaaggtacc acagttggta tgggcaagtc aagcaggagg ttcatcaaca
     901  tgtatgggtt tgatccaaca gagtactcat tcatccaatt cgttgatcca
     951  ctcactgggg cgcagataga agagaatgtc tatgctgaca ttagagatat
    1001  tcaggagaga tttagtgaag tgcgaaagaa aatggttgag aatgatgaca
    1051  ttgaaatgca agccttgggt agtaacacga ccatacatgc atacttcagg
    1101  aaagattggt ctgacaaagc tttaaagatt gatttaatgc cacataatcc
    1151  actcaaaatt tgtgacaaga caaatggcat tgccaaattt cctgagagag
    1201  agctcgaact aaggcagact gggccagctg tagaagtcga agtgaaggac
    1251  ataccaacac aggaagtgga gcatgaagct aaatcgctca tgagaggctt
    1301  gagagacttc aacccaattg cccaaacagt ttgtaggctg aaagtatctg
    1351  ttgaatatgg gacatcagag atgtacggtt ttggatttgg agcatacata
    1401  atagcgaacc accatttgtt caggagttac aatggttcca tggaggtgcg
    1451  atcnatgcac ggtacattca gggtgaagaa tctacacagt ttgagcgttc
    1501  tgccaattaa aggtagg