Sequence of DPV Soybean vein necrosis virus

Soybean vein necrosis-associated virus isolate KY4 nucleocapsid protein (N) gene, complete cds.

ACC No: JF808210

Dated: 2012-07-04 | Length: 834 | CRC: 2069193057

                
ID   JF808210; SV 1; linear; genomic RNA; STD; VRL; 834 BP.
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AC   JF808210;
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DT   29-JUN-2012 (Rel. 113, Created)
DT   04-JUL-2012 (Rel. 113, Last updated, Version 2)
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DE   Soybean vein necrosis-associated virus isolate KY4 nucleocapsid protein (N)
DE   gene, complete cds.
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KW   .
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OS   Soybean vein necrosis-associated virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-834
RA   Khatabi B., Wen R.-H., Hersham D.E., Kennedy B.S., Newman M.A.,
RA   Hajimorad M.R.;
RT   "Generation of polyclonal antibodies and serological analyses of
RT   nucleocapsid protein of Soybean vein necrosis-associated virus: A distinct
RT   soybean infecting tospovirus serotype";
RL   Eur. J. Plant Pathol. 133(4):783-790(2012).
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RN   [2]
RP   1-834
RA   Khatabi B., Wen R.-H., Hersham D.E., Kennedy B.S., Newman M.A.,
RA   Hajimorad M.R.;
RT   ;
RL   Submitted (14-APR-2011) to the INSDC.
RL   Entomology and Plant Pathology, The University of Tennessee, 2431 Joe
RL   Johnson Drive, 205 Ellington Plant Science Building, Knoxville, TN 37996,
RL   USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .834
FT                   /organism="Soybean vein necrosis-associated virus"
FT                   /isolate="KY4"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:1204737"
FT   gene            1. .834
FT                   /gene="N"
FT   CDS             1. .834
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AFH14516.1"
FT                   /translation="MPQTAGPSNAKPVKITESNLARLLKFEEDIEFEKNSTGFKFSEFY
FT                   KTHMGRKFRYASALTFLKNRKAIVNMCKKGTFNFDGQTVKLSVESGDDNSFTFKRLDSF
FT                   LRVKMLEHNFAVFDGTNEEAKQSLCNDLATIPLVQAYGLTVKDKMSAKLAIMIGGSLPL
FT                   LASITGCEAYCFGLAIFQDLKKEQLGIVNFDTKAQAAKVASVLDAKGFKFTEEKNQTLR
FT                   LIAEILKDMAPQMRGVASLEKYNEQIGIISDIIGVHFEMPGKKDGKGKKSKEFSV"
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SQ   Sequence 834 BP; 285 A; 147 C; 185 G; 217 T; 0 other;

jf808210 Length: 834  04-JUL-2012  Type: N  Check: 9512  ..

       1  atgccacaaa cagcaggacc aagcaatgca aaaccagtga agatcactga
      51  gtcaaaccta gcaaggcttc tcaaatttga agaagacata gaatttgaga
     101  aaaacagcac aggattcaag ttcagcgagt tctacaaaac ccacatgggt
     151  cgcaaattca ggtatgcatc tgcattgacc tttctcaaaa acagaaaggc
     201  tattgtcaac atgtgcaaaa aagggacatt taattttgac ggacaaactg
     251  ttaaattgtc tgtagagagt ggtgatgaca atagcttcac ttttaaaaga
     301  ctggatagct ttttgagagt gaagatgctt gaacacaatt ttgcagtttt
     351  tgatggaaca aatgaagagg ctaaacaaag cttgtgcaat gatttagcaa
     401  ccatcccact tgtgcaagct tatggtctga ctgtgaaaga taagatgtca
     451  gcaaagcttg ccataatgat tggtggaagc ttaccccttc tggcatcaat
     501  cacaggttgt gaagcctatt gttttggttt agctatcttt caggacctaa
     551  agaaagaaca gcttggtatt gtcaactttg acacaaaggc tcaagctgct
     601  aaagttgcat ctgtgctgga tgcaaagggc tttaaattca ctgaagagaa
     651  aaatcaaact ctcaggctga ttgctgagat actgaaggac atggcacccc
     701  aaatgagagg agttgcatcc cttgagaagt acaatgaaca gattggaatc
     751  atttctgata tcattggggt ccattttgaa atgcctggaa agaaagatgg
     801  aaaaggcaag aaatcaaagg agttttctgt ttaa