Sequence of DPV Tomato spotted wilt virus

Tomato spotted wilt virus isolate TN-1 nucleocapsid protein gene, complete cds.

ACC No: JF808216

Dated: 2012-07-31 | Length: 777 | CRC: -913141612

                
ID   JF808216; SV 1; linear; genomic RNA; STD; VRL; 777 BP.
XX
AC   JF808216;
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DT   31-JUL-2012 (Rel. 113, Created)
DT   31-JUL-2012 (Rel. 113, Last updated, Version 1)
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DE   Tomato spotted wilt virus isolate TN-1 nucleocapsid protein gene, complete
DE   cds.
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KW   .
XX
OS   Tomato spotted wilt virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-777
RA   Khatabi B., Hajimorad M.R.;
RT   "Molecular characterization of Tomato spotted wilt virus isolates from
RT   Tennessee";
RL   Unpublished.
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RN   [2]
RP   1-777
RA   Khatabi B., Hajimorad M.R.;
RT   ;
RL   Submitted (14-APR-2011) to the INSDC.
RL   Entomology and Plant Pathology, The University of Tennessee, 2431 Joe
RL   Johnson Drive, 205 Ellington Plant Science Building, Knoxville, TN 37996,
RL   USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .777
FT                   /organism="Tomato spotted wilt virus"
FT                   /isolate="TN-1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:11613"
FT   CDS             1. .777
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AFH14522.1"
FT                   /translation="MSKVKLTKENIVALLTQSKDLEFEEDQNLVAFNFKTFCLENLDQI
FT                   KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSNRVGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA"
XX
SQ   Sequence 777 BP; 260 A; 132 C; 169 G; 216 T; 0 other;

jf808216 Length: 777  31-JUL-2012  Type: N  Check: 8499  ..

       1  atgtctaagg ttaagctcac taaggaaaac attgttgctt tgttgacaca
      51  aagcaaagac cttgaatttg aggaagatca gaatctggta gcattcaact
     101  tcaagacttt ttgtctggaa aaccttgacc agatcaagaa aatgagcatt
     151  atttcatgtc tgacattcct aaagaatcgt cagagtataa tgaaggttat
     201  taagcaaagt gattttactt ttggtaaaat taccataaag aaaacttcaa
     251  acagggttgg agccactgac atgaccttca gaaggcttga tagcttgatc
     301  agggtcaggc tcgttgagga aactgggaat tctgagaatc tcaatactat
     351  caaatctaag attgcttctc accctttgat tcaagcctat ggattacctc
     401  ttgatgatgc aaagtctgtg aggcttgcca taatgctggg aggtagctta
     451  cctcttattg cttcagttga tagctttgag atgatcagtg ttgtcctggc
     501  tatatatcag gatgcaaaat acaaagacct cgggatcgac ccaaagaagt
     551  atgacaccaa ggaagcctta gggaaagttt gcactgtgtt gaaaagcaaa
     601  gcatttgaaa tgaacgaaga tcaggtgaag aaagggaaag agtatgctgc
     651  tatacttagt tccagcaatc ctaatgctaa aggaagtatt gctatggaac
     701  attacagtga aactcttaac aagttctatg aaatgttcgg ggttaaaaaa
     751  caggcaaaac ttgcagaact tgcttaa