Sequence of DPV Tomato yellow fruit ring virus

Tomato yellow ring virus strain TYRV-t nucleocapsid (N) gene, complete cds.

ACC No: JF836811

Dated: 2011-08-14 | Length: 825 | CRC: -244489375

                
ID   JF836811; SV 1; linear; genomic RNA; STD; VRL; 825 BP.
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AC   JF836811;
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DT   14-AUG-2011 (Rel. 109, Created)
DT   14-AUG-2011 (Rel. 109, Last updated, Version 1)
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DE   Tomato yellow ring virus strain TYRV-t nucleocapsid (N) gene, complete cds.
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KW   .
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OS   Tomato yellow ring virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-825
RA   Hassani-Mehraban A., Peters D., Kormelink R.;
RT   "Tomato yellow ring virus (TYRV-t) infecting gazania in Teheran province,
RT   Iran";
RL   Unpublished.
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RN   [2]
RP   1-825
RA   Hassani-Mehraban A., Peters D., Kormelink R.;
RT   ;
RL   Submitted (26-APR-2011) to the INSDC.
RL   Plant Sciences, Laboratory of Virology, Wageningen University,
RL   Droevendaalsesteeg 1, Wageningen 6708 PB, The Netherlands
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FH   Key             Location/Qualifiers
FH
FT   source          1. .825
FT                   /organism="Tomato yellow ring virus"
FT                   /host="Gazania sp."
FT                   /strain="TYRV-t"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran:Teheran Province"
FT                   /isolation_source="leaf"
FT                   /collection_date="20-Nov-2002"
FT                   /db_xref="taxon:304859"
FT   gene            1. .825
FT                   /gene="N"
FT   CDS             1. .825
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid"
FT                   /protein_id="AEL97502.1"
FT                   /translation="MATARVRKENIEKLLAGGEADVVIEAEETAGFNFKEFVLANKAMK
FT                   MTFNNGYTILRNRAGIYKMVKAGQFKFQGNPIIVPSATVSAGQDDWTFRRLEGFIRAKM
FT                   FMELIAVENASEQQKMYEKLCELPMVNAYGLKPSPKFDATTARVMLTLGGPLPLMASLD
FT                   KFAATAFPLAYFQNVKEEALGISKFSTYEQLCKIARVMATKEFTFTGVSKDIFEETIKI
FT                   LNDCAPGTAGAASLNKFNEQIKALESAFGKIVDDNGAGSSKPKPSSKKNDAF"
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SQ   Sequence 825 BP; 273 A; 150 C; 182 G; 220 T; 0 other;

jf836811 Length: 825  14-AUG-2011  Type: N  Check: 6834  ..

       1  atggctaccg cacgagtgcg caaagagaac attgagaagc ttcttgctgg
      51  tggtgaagca gatgtagtga ttgaagctga agaaactgca ggattcaact
     101  tcaaagagtt tgttttggct aacaaagcca tgaaaatgac gttcaacaac
     151  ggttacacaa tcttaaggaa cagagcaggt atttacaaaa tggtgaaagc
     201  aggccagttt aaattccaag gcaatcctat tattgttccc agtgcaactg
     251  tgagcgctgg tcaagatgat tggacattca gaaggttgga aggcttcata
     301  agagccaaaa tgttcatgga actgattgct gtggagaatg caagcgagca
     351  acagaaaatg tatgaaaaac tttgtgagct tccaatggta aacgcatatg
     401  gtttaaaacc tagccctaaa tttgatgcaa ctacagctag agtcatgcta
     451  acactaggag gccctctccc cttgatggca agtcttgata agtttgccgc
     501  aactgcattt ccattagctt atttccagaa tgtgaaagaa gaagctttgg
     551  gaataagcaa attttcaact tatgaacagc tgtgcaagat tgcccgagtt
     601  atggcaacta aagaattcac tttcactggg gtctccaaag acattttcga
     651  agaaaccata aaaattctca atgactgtgc tccaggaact gctggtgctg
     701  cttcattgaa taagttcaat gaacaaatta aagctcttga aagtgctttt
     751  ggaaaaattg ttgatgataa tggtgctggg tcttcaaaac ctaaaccatc
     801  ttccaaaaag aatgatgcat tttaa