Sequence of DPV Thiafora virus

Erve virus segment S, complete sequence.

ACC No: JF911699

Dated: 2013-04-26 | Length: 2180 | CRC: 569629900

                
ID   JF911699; SV 1; linear; viral cRNA; STD; VRL; 2180 BP.
XX
AC   JF911699;
XX
DT   19-AUG-2012 (Rel. 113, Created)
DT   26-APR-2013 (Rel. 116, Last updated, Version 2)
XX
DE   Erve virus segment S, complete sequence.
XX
KW   .
XX
OS   Erve virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Nairovirus.
XX
RN   [1]
RP   1-2180
RX   DOI; 10.1007/s11262-012-0796-8.
RX   PUBMED; 22864548.
RA   Dilcher M., Koch A., Hasib L., Dobler G., Hufert F.T., Weidmann M.;
RT   "Genetic characterization of Erve virus, a European Nairovirus distantly
RT   related to Crimean-Congo hemorrhagic fever virus";
RL   Virus Genes 45(3):426-432(2012).
XX
RN   [2]
RP   1-2180
RA   Dilcher M., Koch A., Hasib L., Dobler G., Hufert F.T., Weidmann M.;
RT   ;
RL   Submitted (02-MAY-2011) to the INSDC.
RL   Department of Virology, University Medical Center Goettingen, Kreuzbergring
RL   57, Goettingen, Lower Saxony D-37075, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2180
FT                   /organism="Erve virus"
FT                   /segment="S"
FT                   /lab_host="Vero-E6 cells"
FT                   /mol_type="viral cRNA"
FT                   /note="serogroup: Thiafora"
FT                   /db_xref="taxon:248062"
FT   gene            45. .1937
FT                   /gene="N"
FT   CDS             45. .1937
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleoprotein"
FT                   /db_xref="GOA:J3S7E7"
FT                   /db_xref="InterPro:IPR003486"
FT                   /db_xref="UniProtKB/TrEMBL:J3S7E7"
FT                   /protein_id="AFH89034.1"
FT                   /translation="MENLIDFSGRDGLDRWLRATFPDVILSVGLTNYGSLMTSVPDLSH
FT                   FEQMARQAKSEQEKDAVYSKALTEATRKAAPIAACALTSSKEMVKKGLQWFEDQIISED
FT                   GNFLVWHQNYEQLKKAPPSFEQLMGYQMSALNWRQSVGYGQLEETAVLVSQVIAQFSVP
FT                   GTLVVTVQEMIKDMIARRGGGPKRGVSEEHVRCCVDIMNGNLSALINPAWGDIDKKNKN
FT                   GLMLLTTGIAKLRELYGPAAMVKVQQAADKFGEWGKAQDVLDQSRVQEIHQVLLKSIAE
FT                   STSLGGGAAVFKNQIAQIDSVFSSYYWMWRAGITPESFPLLSDFLFELGQNARGSAKII
FT                   KTLDRIGLKWSKPLVNLFADSTFKMGRIHMHPAILTTGRLNEMGLCFGIIPASHPESAV
FT                   NGSGFAKNILNVRTDGMNPSAQLIVQLFDIQRQSRTLSDLDVVSSEHLFHQILVGKRTA
FT                   YQNAFQVKGNATDTKIVGFDPPKIDKNKAIRDAVDQHLMASGYAVAPERSVMDLRREME
FT                   EREHKQRLEALAARAREAEAWEASRRAEMIQKRSGVRGGPTVQTQTLTVQEQYTIPKPM
FT                   QSPQVQLMGAQGSVQYLGAGAQQPSDPWFQSQASATSIPQQLPTEDYTTINLFK"
XX
SQ   Sequence 2180 BP; 670 A; 456 C; 512 G; 542 T; 0 other;

jf911699 Length: 2180  26-APR-2013  Type: N  Check: 8085  ..

       1  tctcaaagaa agttgtgctg ttactgtttc acactttctt tgagatggag
      51  aacctaattg acttttcggg cagagatgga cttgacagat ggcttagagc
     101  aacctttcca gatgttatcc ttagtgttgg cttaaccaat tatggctcac
     151  ttatgacttc agtgcctgac ctcagtcatt ttgaacaaat ggctcgccaa
     201  gcaaagtcag aacaggaaaa ggatgctgtc tactccaaag cactgactga
     251  ggcaactagg aaagcggccc caattgctgc ttgtgctctc acatcaagca
     301  aagaaatggt taaaaaagga ttgcagtggt ttgaggacca gattatatca
     351  gaagatggaa actttttggt gtggcatcag aattacgaac aactgaaaaa
     401  agctcctccc tcatttgaac agctcatggg ctatcagatg tcagcactca
     451  actggcgcca gagtgtaggg tatggtcaac tagaagaaac tgcagtcctt
     501  gttagtcaag tgattgcaca gttttcagta cctggaactc ttgttgtaac
     551  agttcaagaa atgataaaag acatgattgc cagaagagga ggtgggccaa
     601  agaggggtgt gagtgaggag catgtcagat gctgtgttga cataatgaat
     651  ggaaatcttt ctgcccttat caatccagca tggggagata ttgataagaa
     701  aaacaagaat ggtctaatgc tactcaccac aggtattgct aaacttcgag
     751  agctctatgg cccagctgct atggtgaaag tccagcaggc agcagataag
     801  tttggagagt gggggaaggc acaagatgtg ttagatcaaa gcagagttca
     851  agaaattcac caggtcttgc taaaatcaat agcagagagc acatcacttg
     901  gaggtggggc tgcagtattc aagaatcaaa ttgcacaaat tgattcagtt
     951  ttcagcagct actattggat gtggcgtgct ggtatcacac ctgaaagttt
    1001  tcctctgtta tcagacttct tatttgaact aggacagaat gcaagaggca
    1051  gtgcaaagat catcaaaact cttgaccgga ttggtttaaa atggagcaag
    1101  ccacttgtca acttgtttgc agacagcact ttcaaaatgg gaaggattca
    1151  catgcatcca gctattctca caactggcag attgaatgaa atgggtttat
    1201  gttttggcat tatacctgca agtcacccgg agtctgctgt gaatggttct
    1251  ggatttgcaa aaaacatcct gaatgtaagg actgatggaa tgaacccttc
    1301  agcacaattg attgttcaac tcttcgacat ccaaagacag tccagaaccc
    1351  ttagtgatct ggatgttgtt tcgtctgaac acctcttcca tcaaatctta
    1401  gtagggaagc ggactgccta ccaaaatgcc ttccaagtga aaggaaatgc
    1451  aacagatacc aaaatagtag gatttgaccc acccaaaata gataagaaca
    1501  aagccatcag agatgcagtt gatcagcacc tgatggcaag tgggtatgca
    1551  gttgcgccag aacgttccgt aatggatttg aggagagaaa tggaggaaag
    1601  ggagcacaaa cagaggcttg aagcactggc tgctagagct agagaggcag
    1651  aggcttggga agcatccaga cgagctgaaa tgattcaaaa aagaagtggt
    1701  gtaagaggtg gtcctacagt gcagactcaa actctgacag ttcaagagca
    1751  gtataccatt cctaaaccca tgcagagtcc acaggttcag ctcatgggtg
    1801  ctcaaggatc agttcagtac ttgggtgccg gtgctcagca accatcagat
    1851  ccctggtttc aaagtcaggc ttctgccaca agcatccccc agcagctgcc
    1901  tacagaggac tacactacta taaatctctt caagtaagca ttaaagttta
    1951  acatgtatgc cactaagtta ccattaaaac gttactaaca aagctcgggg
    2001  caaccagcac gactcaacaa gcgcctcgca gggtactggt ggttgtcctt
    2051  tggctttatg ctacatctaa caactttgca ccacaaatgc ttcgcaggac
    2101  actggcagca gcacatttag cttagatcac cttctccaat gacacttctg
    2151  taacagtatg cagcaacact atctttgaga