Sequence of DPV Tomato leaf curl China betasatellite

Tomato leaf curl China virus satellite DNA beta isolate JX-2, complete genome.

ACC No: JF919829

Dated: 2011-10-18 | Length: 1341 | CRC: -2121534734

                
ID   JF919829; SV 1; circular; genomic DNA; STD; VRL; 1341 BP.
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AC   JF919829;
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DT   18-OCT-2011 (Rel. 110, Created)
DT   18-OCT-2011 (Rel. 110, Last updated, Version 1)
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DE   Tomato leaf curl China virus satellite DNA beta isolate JX-2, complete
DE   genome.
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KW   .
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OS   Tomato leaf curl China virus satellite DNA beta
OC   Viruses; Satellites; Satellite Nucleic Acids;
OC   Single stranded DNA satellites;
OC   Begomovirus-associated DNA beta-like sequences.
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RN   [1]
RP   1-1341
RA   Meng J.R., Li Z.B., Wei M.C., Zou C.W., Liao Y.M., Chen B.S.;
RT   "Molecular identification of the causal agents causing tobacco leaf curl
RT   disease in partial regions of Gunagxi Province";
RL   Unpublished.
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RN   [2]
RP   1-1341
RA   Meng J.R., Li Z.B., Wei M.C., Zou C.W., Liao Y.M., Chen B.S.;
RT   ;
RL   Submitted (05-MAY-2011) to the INSDC.
RL   Guangxi Key Laboratory of Subtropical Bioresource Conservation and
RL   Utilization, Guangxi University, 100 Daxue East Road, Nanning, Guangxi
RL   530004, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1341
FT                   /organism="Tomato leaf curl China virus satellite DNA beta"
FT                   /host="Nicotiana tabacum"
FT                   /isolate="JX-2"
FT                   /mol_type="genomic DNA"
FT                   /country="China:Guangxi,Jingxi"
FT                   /collection_date="13-May-2010"
FT                   /db_xref="taxon:278069"
FT   gene            complement(206. .562)
FT                   /gene="C1"
FT   CDS             complement(206. .562)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="putative C1 protein"
FT                   /protein_id="AEQ38925.1"
FT                   /translation="MTIQYTNTKGLKFIIDVRLQGPKFVMVKIQFSSTRAPAMIKRRFN
FT                   IPYGHNGIIIPFDFNGLETGIRDMMEMFYKDACYEQFKQEEMVEMIDLLMMHEANVLDI
FT                   NLDVSFDVSQNATT"
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SQ   Sequence 1341 BP; 402 A; 278 C; 273 G; 388 T; 0 other;

jf919829 Length: 1341  18-OCT-2011  Type: N  Check: 5841  ..

       1  accgtgggcg agcggtgttt ttgccgtctg tgtgggtccc atctatgtgg
      51  tggacttaat tgggcctctt ttattgggcc agtagcttcg agtctggccc
     101  gtatctatgt ttctctcatt tcccgagaag caaaatatac gcatattttg
     151  ctcttaagta gttattaaag aaagtgcatt ttttttatta ataatgaaga
     201  tacatttatg tagttgcatt ctgtgacaca tcaaatgaca cgtctaaatt
     251  aatatctaat acatttgctt cgtgcatcat cagtagatcg atcatttcaa
     301  ccatctcctc ttgtttgaat tgttcgtagc acgcgtcctt gtagaacatt
     351  tccatcatgt cccttattcc tgtctctagc ccgttgaagt cgaatggtat
     401  tatgatcccg ttgtgaccgt atggaatgtt gaacctcctt ttgatcatcg
     451  ccggagctct tgtggaggag aactgtatct tgaccattac aaactttggt
     501  ccctgcaaac gcacgtctat gatgaacttc agacccttcg tattggtgta
     551  ttggatcgtc atttcgtggt gcctttgctt ctggagttgg tcttttttat
     601  agctgactct atggtgacat cctgccccat gtagatatgt ggcttatttt
     651  ctaccatata aaccttatct tccgtatttg atggtgacat ccatcaaaga
     701  aaaaaaaaag aagacaaaaa actaaaaaca tgatgatcat ccaagtgatg
     751  atcatcctct aaagaattaa agagatatga aaacacacag caacagcaag
     801  gcaagacaag gacagaaccc tttatccaag aatggtagcg cagcggacga
     851  aaaccaaact ggacacgaca aaaaacaaaa caagaaactc aaaaccaaaa
     901  aaagaaatcc acaaaagaaa aaaaagaaaa tgggccgttg atctattggg
     951  cttatatgtt tcttattgga cttatatccg gtaagaagta aatatacgta
    1001  tttacgaatt accgacggta aaaaaaaaga agaattttaa ctgttaggta
    1051  aataaatggg caccaaaggt aaatgagaca ccaatacatc ggtgcctcta
    1101  ttggtaccca ataaagaaat tgactaaact acccttgctt ttatgttatt
    1151  caggcgcgtg ggagtgcgct gaaaaagtta gttttctctc tcctaaactc
    1201  gtcggagaag acgattgagg cacttcccgg catcaatttg cgacacgcgc
    1251  ggcggtgtgt acccctggga gggtagggta ccactacgct acgcagcagc
    1301  cttagctacg ccggagctta gctcgcccac gttctaatat t