Sequence of DPV Punique virus
Punique virus strain PI-B4-2008 polymerase gene, complete cds.
ACC No: JF920133
Dated: 2013-05-31 | Length: 6317 | CRC: 1730991343
ID JF920133; SV 1; linear; genomic RNA; STD; VRL; 6317 BP.
XX
AC JF920133;
XX
DT 31-MAY-2013 (Rel. 116, Created)
DT 31-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE Punique virus strain PI-B4-2008 polymerase gene, complete cds.
XX
KW .
XX
OS Punique virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus.
XX
RN [1]
RP 1-6317
RA Palacios G., Savji N., Shah A., Lipkin W.I.;
RT "Genomic and phylogenetic characterization of Naples serogroup
RT phleboviruses";
RL Unpublished.
XX
RN [2]
RP 1-6317
RA Palacios G., Savji N., Shah A., Lipkin W.I.;
RT ;
RL Submitted (05-MAY-2011) to the INSDC.
RL Center for Infection and Immunity, Columbia University, 772 W 168th Street,
RL 17th Floor, New York, NY 10032, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .6317
FT /organism="Punique virus"
FT /segment="L"
FT /host="Phlebotomus sp."
FT /strain="PI-B4-2008"
FT /mol_type="genomic RNA"
FT /country="Tunisia"
FT /collection_date="2008"
FT /note="serogroup: Naples"
FT /db_xref="taxon:693015"
FT CDS 19. .6306
FT /codon_start=1
FT /product="polymerase"
FT /protein_id="AFH88995.1"
FT /translation="MERILRKQPQPEGSLTIHQLRRYESSIYDTPIPAYVVKHSSDGVA
FT IDIATSDLAEGQSGSTIQPYETIPAQNLTLFKHDYTFGHLADTTDKKFVEVFGVMENRA
FT DDADYQSPDMIIETESGHVYVVEFTTTMGDVNSAELAARNKIAKYEIACLNRSAIKPIS
FT LYIIAVHFNGVVSNLELTDEEVNEIVFRFRLARDIFEELREINPSLFDSDETISRLDRE
FT VNSIMSSIQIDWDTTESKFPSFKKELFENFIMEDVDNDYITRIVKKCTDDSIRGIEQDN
FT FYSIDISNRERYEMNFRKAVGEINNKIAEMVSHDFLRDVDDHKSTVQFPAWVTLEGVPG
FT KDLEPLKSLNVEGSHPMCKIWNKVCTNATIEKIERMHDDPIQELEYAMSGSTERSVERN
FT KYHRTVLTLSQDEREYAAVLGVCGKKNSNLGAVKEARVRSKKGFSIDHDISKVTDYLFS
FT DDLSCLQCEDGLYNPLSVDHPLRMLAMGLHQPTMIHSDDLMPETLECHSDILKTPLGSW
FT LQMVSIIGAELSASVKQHVKPNQFIVKRLMNSGIFLLIKPTTSKGHIFVSLAVDKRLLA
FT MEIDKSGVFKPSIDAGDLLVTDFVSFKLSKITNLCKASAVMEASICFWAECYGYNPWDF
FT IKRTGERRLREAWFMMKLSLLTMLEDKAATEELQTMQRYVIMEGFVSLPEIPRPYKMLS
FT KIPKVLRSELQVFLTQRLFFTIQRISKHPFVLHKMNSVIKWKDLFNPYSGDNIDELQIL
FT ISCCYNGYFKNKEEETEPSALSAMYKKIIELEHLRPKSDDFLGYKDPEEPKMHEFSRSY
FT LKLLCDHAKAKLKRQYGRGVLAQIESSIVREVSSITLERLATLKATSNFNDSWYVYKDV
FT KDKNYTRDKLLVKMTKFAHRGKTLAIEMFDECMTRIEEKGCMEICLFKKQQHGGLREIY
FT VMGADERIVQSVIEAIARAIGRFFDSDTLCNPANKMRIPETHGQRAKKRCGRSVWTCAT
FT SDDARKWNQGHFVTKFALMLCQFTPEEWWPMIIRGCSMFTNKFMMMNLDFLRIIDSHKE
FT LNIEDEFVTKLFKAYHGESVEPWIDQGRTYLKTSTGMMQGILHFTSSLLHSLHQEFIRT
FT ASLQLFTQRMGSDAASRVVCDMMQGSDDSSMMISFPADNEKIRMRYKLVAAMCFRIKKS
FT LGIYAGIYPSEKSTSNTDFVMEYNSEFFFHSQHVRPTIRWIAASCSLPEVETLVARQEE
FT AANLLTSITEGGGSFSLAAMVQQSQCTIHYMLMGMGVSALFGEFTKAISKWMDPGLGFF
FT LFDNPYSAGLSGFKYNLYRAIMNSNLKSVYSFFMKRVKGGSVRADGIISESCSVSPGGA
FT IVMSSTLRWGSVEKFKRLRNRLNIPEDWREMINETPEILYRAPQTGTEIMLRIAEKVHS
FT PGVVSSLSTGNAVCKVMASSVYFLSACIFEDAGNQEYKVMNSDKYSLLQKIIAFNQFEE
FT ENDISQEDLLFLFPNLSEFEAFDSIIYDKGRFNVIPRASQREATQTRIVVFEHHSSARV
FT APEKLVSDKWFGTRKSKIGSAGFKQEWDRLKVIVRWLRDTPEETLMASPFSNHVQIRNF
FT FARMEGKPRVIKVTGAPVKKRSGMSKIAMAIRDNFCKTGFLQGLEDEVGHSRAMQVEKL
FT KHYLFSVLMGPYTEDAKLEFIVKILKEEPQVILNYNDKRSRANTISLLQRFIKSDVGIA
FT ALIEDMKAGIFGAFTKTQQFSQSSINNKYYGKGIWKGVIDGYQIQIEIDGKEGMPTYLS
FT SITVSNCSKPWVLTQSLKAWCEDMQVSNNTDLSKHNKNANYWMYGFKMYGSSYPYGCPI
FT YIVRQDITNLGLLHDDDIDIKVRRNTINLFVRSHDKRPRDLHILSYTPSDSDISSISSK
FT HIMEDEYFVYKGLFSVEPTRSWMLCQSLPWNFVRPVVHLASGKRAAPRQLDLTRLREII
FT RLCTESSIRNKVGTVYSQVKPEKMIESEAIDMSDMFDMMIEEGMDDAFEDLADFLTVDE
FT DPDYMAEVDFDEESLNLFGPAHYKELQSLTVLAHPLMDGFVTRLVTKLGRSKIRRLLEK
FT NIITSDCRELAELLFLSLDRDPSQIKEELIQGDSPTEVTDDLLG"
XX
SQ Sequence 6317 BP; 2046 A; 1161 C; 1471 G; 1639 T; 0 other;
jf920133 Length: 6317 31-MAY-2013 Type: N Check: 4556 ..
1 acacaaagag gcccaaatat ggaaagaatc cttagaaaac aaccacaacc
51 tgagggaagc ttaacaatac atcagctgag gaggtatgag tcatcaatat
101 atgacacacc tatacctgcc tatgttgtta agcatagttc tgatggtgtg
151 gcaattgaca tagcaacttc tgacttagct gaaggtcaat ctgggtctac
201 tattcagcca tatgaaacta tccctgccca aaatctgact ctcttcaaac
251 atgactacac atttggtcat ctggctgaca ctacagacaa aaagtttgtg
301 gaagtctttg gagttatgga aaatcgtgct gatgatgcag actatcagtc
351 accggacatg ataattgaga ctgagtcagg ccatgtgtat gttgttgagt
401 tcactaccac aatgggagat gtgaactcag cagagcttgc tgctaggaat
451 aagatagcca agtatgagat agcatgcttg aaccgatcag cgataaagcc
501 catatcacta tacattatag ctgtccactt taacggggtg gtttcaaatc
551 ttgaattgac tgatgaagaa gtcaatgaga ttgtcttcag gttcagacta
601 gcacgagaca tttttgaaga gcttagagag ataaatccaa gcttgtttga
651 ctcagatgag acaataagca gattagacag ggaggtgaac agcataatgt
701 catcgatcca gattgactgg gacacaacag aaagcaaatt tccaagcttc
751 aagaaagagc tctttgagaa ttttatcatg gaagatgtgg acaatgatta
801 tataacaaga attgtgaaga agtgcactga tgattctatc agaggaatag
851 aacaagacaa tttctactca attgatatca gcaacagaga aagatatgaa
901 atgaatttca gaaaagcagt tggtgagatt aataataaga ttgcagaaat
951 ggtgagtcat gattttctaa gagacgtgga tgatcacaag tcaactgtgc
1001 agtttccggc ctgggtgacc ctagaaggag taccggggaa ggacttagaa
1051 cctctaaagt ccttgaatgt ggaaggaagt cacccaatgt gtaagatttg
1101 gaacaaggtc tgcacaaatg ccacaattga aaagattgag agaatgcatg
1151 atgacccgat tcaagagtta gagtatgcaa tgtcaggcag cactgagaga
1201 tctgtggaga ggaacaagta tcatagaact gttctgaccc tcagtcaaga
1251 tgagagggag tatgcagctg tgctaggtgt ctgtggcaaa aagaattcaa
1301 atctgggggc agtaaaagag gccagggtta ggagtaagaa gggcttctcg
1351 attgatcatg atattagcaa ggtcactgat tacttgtttt ctgatgacct
1401 atcatgcctt cagtgcgagg atggactata caaccccttg agtgttgatc
1451 atcccttgcg gatgctggct atgggtctac accagccaac aatgatccac
1501 tctgatgacc taatgcctga aaccttagag tgccattcag atattctcaa
1551 gacacctctt ggtagctggc tgcaaatggt ctcaataatt ggtgcagagt
1601 tgtcagcatc agttaaacaa catgtgaagc ctaatcagtt tattgtcaag
1651 agattgatga attcagggat tttcttgctc atcaagccca cgacttccaa
1701 gggccatatc tttgtttctc tggctgttga taagaggctt cttgcaatgg
1751 aaatagacaa gtcaggagtg ttcaagccta gcatagatgc cggagattta
1801 ttagtcactg attttgtgtc attcaaactg agtaagataa ccaatctgtg
1851 caaggcttca gctgtaatgg aagcctccat ttgcttttgg gctgaatgct
1901 acggttacaa cccatgggat ttcataaaga ggacaggtga gagaaggctg
1951 agagaggcct ggttcatgat gaagctttct cttctaacta tgctagaaga
2001 taaagcagca actgaggaac tccaaaccat gcagaggtat gttattatgg
2051 agggatttgt ttctcttcca gagataccta gaccatacaa gatgctgtct
2101 aagattccaa aggtcctgcg atccgagctg caggttttcc tcactcagag
2151 attattcttc actatacaaa gaatatcaaa gcacccattt gtcttgcaca
2201 agatgaacag tgttattaag tggaaagatc tcttcaatcc atactctggt
2251 gacaacatag atgagcttca gatactaata agctgctgct acaatggata
2301 cttcaaaaac aaagaagagg aaacagaacc atcagcattg tcagcaatgt
2351 ataagaaaat cattgaactt gagcacttaa ggccaaaaag cgatgacttt
2401 ctgggataca aggatccaga agagcccaag atgcatgaat tcagcagaag
2451 ttacttaaaa ctgctctgtg atcatgcaaa agccaagcta aagagacagt
2501 atggacgagg tgtactggct cagattgaga gcagtattgt tagagaggtg
2551 tcttctataa ctcttgagag actagccact ctaaaagcca ccagcaattt
2601 taatgattca tggtacgtgt acaaagatgt taaggacaaa aattatacca
2651 gagacaaact attagtgaag atgacaaagt ttgctcatag aggcaaaact
2701 ttggcaattg agatgtttga tgagtgtatg accagaatag aagaaaaggg
2751 ctgcatggag atctgcttgt ttaagaaaca gcagcacgga ggactacggg
2801 agatctatgt tatgggagca gatgagagaa tagttcagtc tgtaatagaa
2851 gctattgcca gggccatcgg gagattcttt gactctgaca cactatgtaa
2901 tcctgccaac aagatgagga ttccagagac tcatggtcag agagcaaaga
2951 agagatgtgg aagatctgtt tggacatgtg caacatctga tgatgcaaga
3001 aagtggaacc agggtcactt tgtcactaag tttgcactta tgttatgcca
3051 gttcacacca gaggaatggt ggccaatgat catcagagga tgctcaatgt
3101 tcactaataa gttcatgatg atgaatctgg acttcttaag gattatagac
3151 agccacaagg agctaaatat agaagatgaa tttgtcacta aactttttaa
3201 ggcgtatcat ggagagtcag tggagccatg gattgatcag gggagaacat
3251 atctgaagac aagcacaggc atgatgcaag gaatactaca ttttacctct
3301 tcattactac actctcttca tcaggaattc ataaggacag catctcttca
3351 attatttacc caaagaatgg gctcagacgc agcatccagg gtagtctgtg
3401 acatgatgca gggctcagat gacagtagca tgatgataag ctttccagca
3451 gacaatgaaa agataagaat gagatataag cttgttgctg caatgtgttt
3501 caggataaag aagtcgcttg gaatctatgc tggtatctat ccgtcagaga
3551 aatcaacatc aaacaccgac tttgtgatgg aatataactc agaattcttc
3601 tttcattctc agcatgtgag accaaccatc agatggattg cagcttcctg
3651 ttctctacct gaggtggaga ctttggttgc tagacaggag gaagcagcaa
3701 acctactaac ctctataaca gaaggaggtg gctccttttc actagcagca
3751 atggtgcagc aaagccagtg cacaattcat tacatgctaa tgggaatggg
3801 tgtcagtgct ctgtttggtg agttcacaaa ggcaatctca aaatggatgg
3851 atcctggact aggattcttc ttgtttgata atccttactc tgctgggtta
3901 tctggcttca agtataacct atacagagcc atcatgaact caaatctcaa
3951 gtcagtatat tcattcttca tgaagcgtgt taaaggagga tcagttagag
4001 cagatggaat catcagtgaa tcatgtagtg tgagtccagg tggagcaatt
4051 gtgatgagct caactctgag atggggttct gttgaaaagt ttaagaggct
4101 aagaaacaga ctcaacatcc ctgaggattg gagagagatg attaatgaga
4151 ctccagaaat cctgtacaga gcaccccaaa ccggaacaga gataatgctt
4201 cgaattgcag aaaaagttca tagtcctgga gttgtctctt cattgagcac
4251 aggtaatgct gtctgtaagg tcatggcatc ttctgtttat ttcctctcag
4301 cctgcatatt tgaggatgca ggtaatcaag agtataaggt gatgaatagc
4351 gacaagtata gcctactgca aaagatcatt gccttcaacc agtttgagga
4401 agagaatgac ataagccaag aagacttatt gtttctgttt ccaaacttat
4451 cagaatttga agcctttgat tcaatcatat atgataaagg gagattcaat
4501 gttatcccca gagccagcca gagagaagcc acacagacta gaatagtcgt
4551 ttttgagcac cactcttcag cccgagtcgc tcctgagaag ctagttagtg
4601 ataagtggtt tggaacaagg aagagcaaaa taggctcagc aggattcaag
4651 caagaatggg atcggctcaa agtcattgtt agatggctaa gagatactcc
4701 agaagaaaca ctcatggctt ccccgttctc aaaccatgtg cagatcagga
4751 atttctttgc caggatggaa ggcaaaccca gagtaatcaa ggtgacaggg
4801 gcacctgtca agaaacgttc aggcatgagc aagatagcca tggcaataag
4851 agacaacttc tgcaagaccg ggttcttgca aggattagaa gatgaagttg
4901 gtcatagtag agctatgcag gttgaaaagc tgaagcacta tctattctct
4951 gtgctaatgg gaccttacac agaggatgct aagttggaat tcatagtgaa
5001 gattctaaaa gaggaacctc aagtaattct gaattacaat gataagaggt
5051 ctagagcaaa cacaataagc ctgctacaaa gattcatcaa gagtgatgtg
5101 gggatagcag cccttattga agacatgaag gctgggatct ttggggcatt
5151 cactaagact cagcagttca gtcaatcatc aatcaataat aaatactatg
5201 gaaagggtat atggaagggt gtgattgatg gctatcagat tcaaattgag
5251 atagatggga aggaagggat gccaacctac ttgagctcca taacagtttc
5301 caactgctct aagccatggg ttcttaccca aagtctgaaa gcatggtgtg
5351 aggacatgca agttagcaac aacacagatc tatcaaaaca taataaaaac
5401 gcaaactact ggatgtatgg attcaagatg tatggctcat catacccata
5451 tgggtgtcct atatacatcg tgagacaaga tattactaat cttgggcttt
5501 tacatgatga tgatattgac atcaaggtga ggagaaacac aatcaacctt
5551 ttcgtgagaa gccatgacaa aaggcctcgg gacctgcaca tactgtctta
5601 cacaccatca gactcagaca tcagctcaat aagttcgaag cacatcatgg
5651 aagatgagta ttttgtctac aaaggattat tctctgtgga gcctaccaga
5701 tcatggatgc tatgtcaatc actaccttgg aactttgtga gacctgttgt
5751 tcatcttgct tcagggaaaa gggctgctcc ccgtcagctc gatctgacaa
5801 gattacgaga gattataaga ttgtgcacag aatcatcaat cagaaacaaa
5851 gttggcacag tctacagcca agtcaagcca gagaagatga tagaatcaga
5901 ggctatagac atgagtgaca tgtttgacat gatgatagaa gaggggatgg
5951 atgatgcatt tgaagatctt gctgacttcc taacagttga tgaagaccct
6001 gactatatgg cggaagttga ctttgatgaa gagagcctga atctttttgg
6051 gcctgcgcat tacaaagaat tgcagagtct tacagttttg gctcacccat
6101 taatggatgg atttgtaact cgattagtga caaagttagg aagatccaaa
6151 atcagaagac tgcttgagaa gaatataata acatcagatt gtagagaatt
6201 ggctgagtta ttatttttat ctctagatcg agatccatca caaataaaag
6251 aagaattgat acagggagac agtcctacag aggttactga cgacctactt
6301 gggtagtcat tttcgta