Sequence of DPV Punique virus
Punique virus strain PI-B4-2008 polyprotein gene, complete cds.
ACC No: JF920134
Dated: 2013-05-31 | Length: 4219 | CRC: -603591147
ID JF920134; SV 1; linear; genomic RNA; STD; VRL; 4219 BP.
XX
AC JF920134;
XX
DT 31-MAY-2013 (Rel. 116, Created)
DT 31-MAY-2013 (Rel. 116, Last updated, Version 1)
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DE Punique virus strain PI-B4-2008 polyprotein gene, complete cds.
XX
KW .
XX
OS Punique virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus.
XX
RN [1]
RP 1-4219
RA Palacios G., Savji N., Shah A., Lipkin W.I.;
RT "Genomic and phylogenetic characterization of Naples serogroup
RT phleboviruses";
RL Unpublished.
XX
RN [2]
RP 1-4219
RA Palacios G., Savji N., Shah A., Lipkin W.I.;
RT ;
RL Submitted (05-MAY-2011) to the INSDC.
RL Center for Infection and Immunity, Columbia University, 772 W 168th Street,
RL 17th Floor, New York, NY 10032, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .4219
FT /organism="Punique virus"
FT /segment="M"
FT /host="Phlebotomus sp."
FT /strain="PI-B4-2008"
FT /mol_type="genomic RNA"
FT /country="Tunisia"
FT /collection_date="2008"
FT /note="serogroup: Naples"
FT /db_xref="taxon:693015"
FT CDS 18. .4013
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="AFH88996.1"
FT /translation="MFYAKFVIILCLVQGFSLKYTIISKLGSGTTRQVCLSHSTDLDKV
FT LEISNMEMDAINLLGGFCTLGELRREDCSPNVFSNYVVNVHGTIHSSNCKFVDIVGDRS
FT IEVLNDATPDSFTPGAHNCSSFEKPPFWTDLVPKKNDTDPSPSLLSVLPAAAELDFNLK
FT LKEANDKVEAIQRELVAEKARSGRIEDEARTKMRELEDELRRGWIAEREAKELAHKNLE
FT EERVSKLEIERRMHDLDKKLRQSENDADRLREQYNKKRKSEEEVKTPKASTLNATTTLA
FT TVVLTSLLATGLAAIEQIEERNTNHILNRPGTGVYMASPTLTQTECSLGYGKECKSWEL
FT QVSPLHYPFFTSNVDKYSILESITQEPTLLIKNNNSCELTTSPGSQKQCQKESSTIKKY
FT CTDDARAYFFIDLGGNLSIVHCSNNFVLSEDCNFCISKSGGVGQKIFMPIQDAFCQRGG
FT SESPPVVRYSKDLCSIGLFKIKSCHKSTSRYERMGFIVAGQKKLYLEELKMRYRQEYDE
FT DQFFCYKVKSNSPLQYEKVSPSKCKGVGSQDQKCNGDEYFCNRYPCDTNNPDAHCSLRR
FT HAAVVEVNVGGVWIKPKCVGYEKVLVKRGGLKTEDLSVRECTSCLWECERNKVVVKTHG
FT PKIVSATACSHGSCKSVMQKPSTFLEIPYPGNSEIIGGDIGIHMSERGSPSNIHVVVHC
FT KPKDSCDISDCIFCKHGILNYQCHSVASAVLLSTMIAACLALVGVIVSRSKHAVKFLAS
FT VVAIPFKWVSLLTVWVVKNWKLRITRVIRATNDAIGWENNLEQVRVENAARRPQPAVRY
FT AFYGTTILSILSTGLCCSESLIAESSIMQCTTEDSSTVCKATGTVVLKLGPIGSESCLI
FT LKGLRDNEKQFISIKTISSELTCREGESFWTSLYTPVCLSSRRCHLMGECTGDICLKWK
FT TNKTSAEFTGKTHSEVIHENKCFEQSGGMGYGCFNVNPSCLMVHSYLKPIYKNAFKVFR
FT CVAWNHRVRLGITTHKRNFEITLMAMSTQQTDWGSIGLILDSEGITGTNSYSFMKHGLG
FT SFAIIDEPYVTEPRKGYLGEVRCPTEETAVKASPSCKVAPGLIEYQPEMDVVECTTNMM
FT DPMAIFNRGSLPQVRDGKTFTQSIEKSSVQALTTGEIHASVRLVLDEYEVEYKVVNNDC
FT DSTFVNITGCYSCDEGARLCVKVKASSDVIYHFTDSDNSMNVLFKVSSNIQDYCIVLHF
FT SKPVVNVEGKYDCGRSKKPMLIKGTLIAMAPHDDRVTNGGSSIIINPKGGGVDFLGWLS
FT GLSSWFGGPLKTFLIIAGFLIVGIIIVIIIIILARLGIQQALAKKLK"
XX
SQ Sequence 4219 BP; 1296 A; 763 C; 995 G; 1165 T; 0 other;
jf920134 Length: 4219 31-MAY-2013 Type: N Check: 5392 ..
1 acacaaagaa ggtgcttatg ttttatgcaa agtttgtaat aatcctctgc
51 ttagtgcagg gcttttcttt gaaatataca atcatttcaa agttagggtc
101 tggcactaca agacaagttt gcttaagcca ctcaactgac ttggataagg
151 ttcttgaaat ttccaatatg gagatggatg ccatcaactt gctgggtggt
201 ttctgtacac ttggagaatt aaggagggaa gattgctccc ctaacgtgtt
251 ctcaaactat gttgtcaatg tacacgggac aatacattca tccaattgca
301 agtttgtgga catagttgga gacaggagta ttgaagtcct taatgatgct
351 acaccagata gctttactcc tggagcccac aactgtagca gttttgaaaa
401 accacctttc tggactgacc tggttccaaa aaagaacgat acagaccctt
451 ctccttctct tctctctgtg ctccctgctg ctgccgagct tgactttaat
501 ctaaagctga aagaggccaa tgacaaggtg gaagctattc agagggagtt
551 agttgctgag aaggcaaggt ctgggagaat agaagatgag gctcgcacaa
601 aaatgaggga attggaagat gagctaagaa gaggctggat tgctgagcgg
651 gaagcaaagg agctggctca taagaatctg gaggaagaga gggtaagtaa
701 gcttgagata gaaaggagga tgcatgatct tgacaagaaa ttaaggcagt
751 ccgagaatga cgctgatcga ctgagagagc agtacaacaa gaaaagaaag
801 tcagaagaag aagtgaaaac tccaaaagca tcgacactta atgcgacaac
851 tacactggct acagtggtcc tcacttcttt gttggctact gggcttgctg
901 ctattgaaca gattgaagag agaaacacaa accatatttt gaacagacca
951 gggacaggag tgtacatggc ctcaccgaca cttactcaga cagaatgttc
1001 acttggttat ggcaaggagt gtaaatcttg ggaactgcaa gtcagtccat
1051 tacattaccc tttcttcact tctaatgtgg acaagtacag cattttagaa
1101 tctatcactc aggagccaac tctactgatc aaaaacaaca attcttgtga
1151 attgacaaca agtcctggat ctcagaaaca gtgccaaaag gaatctagta
1201 ccataaagaa gtattgtact gatgatgcta gagcctactt ctttattgat
1251 ctaggaggaa atctatcaat tgttcactgc tcaaataact tcgttctttc
1301 agaggattgc aatttctgca tcagcaagtc tggaggggtt ggccagaaaa
1351 tcttcatgcc aatacaagat gcattctgtc agagaggggg atcagagtca
1401 cctccagtag tcagatactc taaagacttg tgctctatag gactcttcaa
1451 gattaaaagc tgccataaaa gcacatcaag gtatgagaga atgggtttca
1501 tagtggcagg gcagaagaag ctgtacttag aagaattaaa gatgaggtac
1551 agacaagagt atgatgagga ccagttcttt tgttacaagg taaagtcaaa
1601 ctctccactt cagtatgaaa aggtgtcacc atccaaatgc aaaggggttg
1651 gatcacaaga tcagaagtgc aatggagatg agtacttctg caataggtat
1701 ccttgtgata ctaataatcc agatgcacat tgctccttaa gaagacatgc
1751 tgcggttgtc gaggttaatg tcggtggtgt ttggattaag ccaaagtgtg
1801 ttggctatga aaaggtctta gtcaaaagag ggggtttgaa gactgaagac
1851 ctatcagtca gagaatgtac tagctgttta tgggaatgtg agagaaacaa
1901 agttgttgta aagactcatg gccccaagat tgtctctgcc actgcttgta
1951 gtcatggatc ttgcaagagt gtcatgcaga aaccatcaac attcctagag
2001 atcccttatc ctggaaatag tgaaattata ggtggagata ttgggattca
2051 tatgagtgag cgaggctcac cttctaacat tcatgttgtt gttcattgca
2101 agcctaagga ttcttgtgat atctcagatt gcattttctg caagcatgga
2151 atactgaatt accaatgcca tagtgtagcc tcagcagtcc tcctctcaac
2201 gatgattgct gcctgtctag ctcttgttgg agtgatagta tccagatcaa
2251 agcatgcagt taaattccta gcatctgtag tggcaatacc attcaaatgg
2301 gtgtctctac taactgtctg ggttgtgaag aattggaagc tcaggataac
2351 aagagtcata agagccacaa atgatgcaat aggctgggaa aacaatcttg
2401 aacaagttag agtggaaaat gctgcaagaa gacctcaacc cgcagtcaga
2451 tatgcctttt atggaacaac tatcctctca attctaagta ctggcctgtg
2501 ttgttcagaa agcttgatag ctgaatcaag cataatgcag tgcaccaccg
2551 aggatagctc aactgtatgc aaagctactg gaaccgtggt cctgaaattg
2601 ggaccaattg gctctgaatc atgcctgatc ctgaaaggtc ttagagacaa
2651 tgagaagcag ttcatatcca taaagactat ttctagtgag ttgacttgca
2701 gagaaggaga gtcattctgg acctcattgt acaccccagt atgtctaagc
2751 tctcggaggt gtcacttaat gggtgagtgc actggagata tatgcctcaa
2801 gtggaaaact aataaaacat ctgctgaatt tactgggaag actcatagtg
2851 aggtcattca tgagaacaag tgctttgaac agagtggagg aatgggttat
2901 ggatgtttta atgtcaaccc atcatgcttg atggttcact catatcttaa
2951 gccgatctac aaaaatgcat tcaaagtctt taggtgtgta gcttggaatc
3001 atagggtccg tcttggcata acaacacaca aaaggaattt tgaaatcact
3051 ctgatggcaa tgagtacaca gcagacagac tggggttcaa taggtttgat
3101 tctagactct gagggaatca ctggtacaaa ttcctattcc tttatgaaac
3151 atggattggg gagctttgct ataatagatg aaccttatgt gactgagcct
3201 cgaaaaggct atttgggcga agttagatgt cctacagaag agactgcagt
3251 gaaagcttct ccatcatgca aagtcgcgcc tgggttgata gagtaccagc
3301 cagagatgga tgtggtggaa tgcacgacaa acatgatgga tcctatggcg
3351 atcttcaaca ggggttcttt gcctcaagtc agagatggaa agacattcac
3401 tcagtccata gaaaagagct cagtccaagc gttaacaaca ggggaaattc
3451 atgctagtgt gaggcttgtt cttgatgaat atgaagttga gtacaaagtg
3501 gtcaataatg attgtgattc tacctttgtg aacatcacag ggtgctattc
3551 ttgtgacgag ggtgccagac tctgtgtaaa ggtaaaagct tctagtgatg
3601 taatatacca tttcactgac tcagacaaca gtatgaatgt cctctttaag
3651 gtttcttcca acatccagga ttattgtata gtcttacact tttcaaagcc
3701 tgttgtcaat gttgaaggca agtatgattg tggcaggagc aagaagccta
3751 tgctgattaa gggcactcta atcgccatgg cacctcatga tgacagagta
3801 acaaacgggg gttcatcaat tattataaat cccaaaggag gtggagttga
3851 tttcttaggg tggctatcag gattgagttc ttggtttggt ggtcctttaa
3901 aaactttctt aataattgca gggttcctca ttgtaggtat aataatagtc
3951 ataatcatca taattctggc acggcttggg attcagcagg cattggcaaa
4001 gaaattaaaa taactttact atagtgatta agctttatct ttcacatata
4051 attaaattta ttataaattg ggtttaatgg gtggggaact ggcagcggat
4101 gtgtttttag cacgtgcctg acaaacaaat gtagatctat agaagagcct
4151 gattgtgaag taaatatatt gtctgaggtg aattatttgt ttattactga
4201 ctagcaccgg tctttgtgt