Sequence of DPV Punique virus

Punique virus strain PI-B4-2008 nucleoprotein and non-structural protein genes, complete cds.

ACC No: JF920135

Dated: 2013-05-31 | Length: 1870 | CRC: 1322200577

                
ID   JF920135; SV 1; linear; genomic RNA; STD; VRL; 1870 BP.
XX
AC   JF920135;
XX
DT   31-MAY-2013 (Rel. 116, Created)
DT   31-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Punique virus strain PI-B4-2008 nucleoprotein and non-structural protein
DE   genes, complete cds.
XX
KW   .
XX
OS   Punique virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus.
XX
RN   [1]
RP   1-1870
RA   Palacios G., Savji N., Shah A., Lipkin W.I.;
RT   "Genomic and phylogenetic characterization of Naples serogroup
RT   phleboviruses";
RL   Unpublished.
XX
RN   [2]
RP   1-1870
RA   Palacios G., Savji N., Shah A., Lipkin W.I.;
RT   ;
RL   Submitted (05-MAY-2011) to the INSDC.
RL   Center for Infection and Immunity, Columbia University, 772 W 168th Street,
RL   17th Floor, New York, NY 10032, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1870
FT                   /organism="Punique virus"
FT                   /segment="S"
FT                   /host="Phlebotomus sp."
FT                   /strain="PI-B4-2008"
FT                   /mol_type="genomic RNA"
FT                   /country="Tunisia"
FT                   /collection_date="2008"
FT                   /note="serogroup: Naples"
FT                   /db_xref="taxon:693015"
FT   CDS             52. .990
FT                   /codon_start=1
FT                   /product="nucleoprotein"
FT                   /protein_id="AFH88997.1"
FT                   /translation="MISRIFFLKQKSNRKRTNRRFYVDADVDFRGLSYPFSLYGSDMPF
FT                   TVSQNKVKYDSRPTLNHYLSKGEFPAMLSRIMITATSTTLYNQIMLELFSESTHQIKRY
FT                   NKDFLISALRWPTGLASLEFIEFYYADHVFLSDAYTYVTNKMLKLFIKASGLMSADIEA
FT                   QIKIIYRKVLLEGSKYGLTCYDLTGADLIEDICIVQCARVARLAFRKGKTDRLDTCKLI
FT                   YQSLSPYYVKCKPKQEKSEVNTLQTMSCFDSFEYFMAIDLEFRSCALSTSWTRDWPTAK
FT                   EAYELVREESKRRSKKHALMLPVSPDYPPLN"
FT   CDS             complement(1070. .1834)
FT                   /codon_start=1
FT                   /product="non-structural protein"
FT                   /protein_id="AFH88998.1"
FT                   /translation="MSEENYREIALAFLDESADSGTISTWVNDFAYQGFDPKRIVQLVK
FT                   ERGTAKGRDWKKDVKMMIVLNLVRGNKPESMMKKMSEKGAAIVAQLIAAYQLKEGNPGR
FT                   DTITLSRVSAAFVPWTVQALRSLSDSLPVTGTTMDSIAGVTYPRCMMHPSFAGIIDLDL
FT                   PNDTGAMLADAHGLFMLEFSKTINPSLRTKQANEIAATFEKPNMAAMNGRFFTREDKKK
FT                   LLIAIGVLNEDLIPVSAIAKCAEKYRAKVGKM"
XX
SQ   Sequence 1870 BP; 556 A; 453 C; 363 G; 498 T; 0 other;

jf920135 Length: 1870  31-MAY-2013  Type: N  Check: 4779  ..

       1  acacaaaggc ctcctgtact gcgataacac aaaagctaat accaattagc
      51  catgatatca cgtattttct tcctcaagca aaagtctaac aggaagagaa
     101  caaacaggag gttttatgtg gatgcagatg tcgattttag aggactatcc
     151  taccctttca gcttgtatgg aagtgacatg ccattcactg tctcacaaaa
     201  caaagttaaa tatgattcaa gacctactct gaatcattac ttgtcaaaag
     251  gtgaatttcc ggccatgctg agcagaatta tgataacagc cactagcaca
     301  acactttata atcagataat gcttgagcta ttcagtgagt ctacacatca
     351  aattaaaaga tacaacaagg actttctcat aagcgctctc agatggccaa
     401  ctggtcttgc atcactagag ttcattgagt tctattatgc agatcatgtc
     451  ttcctgtctg atgcctacac ttatgtcaca aacaaaatgc ttaaactatt
     501  tatcaaggca tccggcttaa tgagtgctga catagaggct caaataaaga
     551  tcatttacag gaaggttctt ttggagggct caaaatatgg attgacatgt
     601  tatgacctga ctggtgcaga tctcattgag gacatttgta ttgttcaatg
     651  tgctagagtg gcaagacttg catttaggaa aggcaagact gacagattag
     701  atacatgcaa gctaatatac caatcactat ctccatacta tgtaaaatgc
     751  aagccaaaac aagagaagtc tgaagtgaat acacttcaga ccatgagctg
     801  ctttgactca tttgagtact ttatggctat agacttggaa ttcagatcat
     851  gtgcactatc aaccagctgg acaagggact ggcccactgc taaagaagcc
     901  tacgaattgg tgagagaaga gagtaagaga agatccaaaa agcacgctct
     951  gatgctgcca gtttcccctg attacccacc cctcaattaa atcccaaacc
    1001  ctcacccttg tttaccccat aaacccacaa atcccacacc cagaatcccc
    1051  tatccccacc ctaggcagct cacatctttc caaccttggc cctgtacttc
    1101  tctgcgcatt tagcaatggc agacacaggg atcaggtctt cattcaagac
    1151  cccaatagcg atgagcagct tcttcttatc ctcccttgtg aagaatctgc
    1201  cattcatggc agccatgttc ggtttctcaa aggtagcagc aatctcattg
    1251  gcctgcttag ttctcaaaga tgggtttatt gtctttgaaa actctagcat
    1301  gaacaaacca tgagcatcag caagcatggc cccagtgtca tttggcaagt
    1351  caaggtcaat aatcccagca aagctaggat gcatcatgca cctgggataa
    1401  gtgaccccag caatgctatc catggtagtc ccagtcactg gcaatgagtc
    1451  agacaaagac ctaagagctt gcacagtcca agggacaaaa gcagcagaca
    1501  ctctggaaag agtgattgtg tcccttcctg ggttgccctc cttcagctgg
    1551  tatgcagcaa tcaactgagc aacaattgca gcacctttct cagacatctt
    1601  cttcatcatg ctctctggct tgttgcctct gaccagattc agaacgatca
    1651  tcattttcac atcctttttc cagtctctcc ccttggcagt acctctctcc
    1701  ttcaccaact ggactatgcg ctttgggtca aatccttggt aggcaaagtc
    1751  attaacccag gttgaaatag taccagagtc tgcagactcg tctaaaaagg
    1801  ctagggcgat ctctcggtag ttttcctcag acatggttat tagtcagtta
    1851  aaacacggga atctttgtgt