Sequence of DPV Saint Floris virus

Saint Floris virus strain Dak ANB 512 nucleoprotein and non-structural protein genes, complete cds.

ACC No: JF920138

Dated: 2013-05-31 | Length: 1933 | CRC: 335043452

                
ID   JF920138; SV 1; linear; genomic RNA; STD; VRL; 1933 BP.
XX
AC   JF920138;
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DT   31-MAY-2013 (Rel. 116, Created)
DT   31-MAY-2013 (Rel. 116, Last updated, Version 1)
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DE   Saint Floris virus strain Dak ANB 512 nucleoprotein and non-structural
DE   protein genes, complete cds.
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KW   .
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OS   Saint Floris virus
OC   Viruses; unclassified viruses.
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RN   [1]
RP   1-1933
RA   Palacios G., Savji N., Shah A., Lipkin W.I.;
RT   "Genomic and phylogenetic characterization of Naples serogroup
RT   phleboviruses";
RL   Unpublished.
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RN   [2]
RP   1-1933
RA   Palacios G., Savji N., Shah A., Lipkin W.I.;
RT   ;
RL   Submitted (05-MAY-2011) to the INSDC.
RL   Center for Infection and Immunity, Columbia University, 772 W 168th Street,
RL   17th Floor, New York, NY 10032, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1933
FT                   /organism="Saint Floris virus"
FT                   /segment="S"
FT                   /host="Tatera sp."
FT                   /strain="Dak ANB 512"
FT                   /mol_type="genomic RNA"
FT                   /country="Central African Republic"
FT                   /collection_date="1971"
FT                   /note="serogroup: Naples"
FT                   /db_xref="taxon:1170426"
FT   CDS             50. .994
FT                   /codon_start=1
FT                   /product="nucleoprotein"
FT                   /protein_id="AFH89001.1"
FT                   /translation="MLSQVVQLRKWRKRCGKEGASQRFYTLVNCSLERPRYKCSFIDGS
FT                   LPVEVHKHEIAYDSRPTLNHFLIKKQFPKILGVDCISQRGTRQFTPLLRELFSESIHQL
FT                   KRGRCEFILSALRWPTGVPCLQFIEFYMDEMFIYFPDETEVNKYITLIGKASGYPYSTI
FT                   EDQIVILYKKILLEGQKLGLTAMDLPGVDLVMDICVVQAARCAARLTKRSAINDPRYAL
FT                   YLSAAPSEFVTHYLQRKRIFKEGNKWLTLSCLQSYEQFMRHSPSFRRTALSTFWVKDWP
FT                   TLSESNELYKTEHKRQRRDRKVTKWLPASPNFF"
FT   CDS             complement(1124. .1885)
FT                   /codon_start=1
FT                   /product="non-structural protein"
FT                   /protein_id="AFH89002.1"
FT                   /translation="MSEETYAQLAMAFLAEPADWSTLSVWVNEFAYQGFDPKRIVELIM
FT                   ERGKKFNREWKKDVKMMITLNLIRGNKPEAMMRKMSDKGRSIVSELISVYELKEGNPGR
FT                   DTITLSRVSAAFVPWTVRALVALQNDLPVTGAAMDSICGVTYPRAMMHPSFAGVIDLEL
FT                   PNGVGAQLADAHGLFMLEFSKTINPGLRTKQPNEIAATFEKPNLAAMTGKFFTKEDKRK
FT                   VLISVGVINSDLQPNSVVKTCAELYRARVMK"
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SQ   Sequence 1933 BP; 559 A; 423 C; 402 G; 549 T; 0 other;

jf920138 Length: 1933  31-MAY-2013  Type: N  Check: 9522  ..

       1  acacaaagac ctcccgattt tatgcacaaa agtgatacgt acaacagaca
      51  tgctatccca ggttgtgcaa ctgagaaagt ggaggaagag atgtgggaag
     101  gaaggtgcca gtcagaggtt ctacactcta gtgaactgca gcctagagag
     151  gcctaggtat aaatgtagct ttatcgatgg gagtttgcct gtagaagtgc
     201  ataagcatga gattgcttat gatagcaggc caacactgaa tcattttctg
     251  atcaagaaac agtttccaaa gatccttggt gtagactgta tctctcaaag
     301  aggaactaga cagttcacac ccttattacg agaactgttc tctgaatcaa
     351  tacaccagct taagagaggt agatgtgagt tcattttatc tgccctgaga
     401  tggccaactg gtgttccctg cttacaattc attgagttct acatggatga
     451  gatgttcatt tatttccctg atgaaacaga agtcaataag tacatcactc
     501  taattggcaa ggctagtggt tacccttatt ctactataga agatcaaatt
     551  gtcattttgt acaaaaagat tctgttggaa ggtcaaaaac taggactcac
     601  tgctatggac ctccccggtg tagatttagt gatggatatc tgtgtggtgc
     651  aagcagcaag atgtgctgca agactgacta agcggtcagc aataaatgat
     701  ccaaggtatg ctttgtatct gagtgctgct ccaagtgagt ttgtaactca
     751  ctacttgcaa agaaagagga tctttaaaga gggaaataag tggctcactt
     801  tgtcttgttt gcaatcttac gagcaattta tgagacactc tccctcattt
     851  cggagaacag ccctttcaac cttttgggtg aaggactggc caacactttc
     901  tgagtccaat gagttatata aaaccgagca caagaggcaa agaagagata
     951  ggaaagtgac aaagtggctg cccgcttccc ctaatttctt ttgaattttg
    1001  attctttttg attaaccccc cagaattacc aaaatcaagc caaacttacc
    1051  aaattaacct caattaccca agacccacat taatctctta attaaaagag
    1101  attaatgttc ccccgctggc agctcatttc atcactcttg ctctgtacag
    1151  ctcagcacat gttttgacaa cactgttggg ctgcaagtct gaattgatga
    1201  caccaacact gatgaggact ttgcgcttgt cttccttggt gaagaacttt
    1251  ccagtcatgg cagcaagatt tggcttttca aacgttgctg ctatctcatt
    1301  aggctgctta gttcttaaac cagggttgat tgtcttggaa aactcaagca
    1351  tgaatagtcc atgagcatca gccagctggg ctccaacacc attggggagc
    1401  tcaaggtcga tgactccagc aaagcttgga tgcatcatgg cccttggata
    1451  agtcactcca caaatggaat ccattgcagc accagtcaca ggaagatcat
    1501  tctgcagagc tacaagagct ctaacagtcc aagggacaaa ggcagcagag
    1551  accctagaaa gagtgatggt gtctcttcct gggtttccct ctttcagttc
    1601  atagactgaa attagttcag acacaatgga acgtcctttg tctgacatct
    1651  tcctcatcat ggcctcaggc ttatttccac ggatcaagtt caaagtgatc
    1701  atcatcttca catctttctt ccactctctg ttgaatttct tccctctctc
    1751  catgatcaat tcaacaatcc ttttgggatc gaatccttga taagcaaact
    1801  cattaaccca tactgaaagg gttgaccagt cagcaggttc tgccaaaaag
    1851  gccatagcca attgagcata ggtctcttca gacatgtttg ttttcactag
    1901  ttagtgttaa tcaatattcg ggaatctttg tgt