Sequence of DPV Naples virus
Naples virus strain Sabin polyprotein gene, complete cds.
ACC No: JF939844
Dated: 2013-05-31 | Length: 4222 | CRC: -211086084
ID JF939844; SV 1; linear; genomic RNA; STD; VRL; 4222 BP.
XX
AC JF939844;
XX
DT 31-MAY-2013 (Rel. 116, Created)
DT 31-MAY-2013 (Rel. 116, Last updated, Version 1)
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DE Naples virus strain Sabin polyprotein gene, complete cds.
XX
KW .
XX
OS Naples virus
OC Viruses; unclassified viruses.
XX
RN [1]
RP 1-4222
RA Palacios G., Savji N., Shah A., Lipkin W.I.;
RT "Genomic and phylogenetic characterization of Naples serogroup
RT phleboviruses";
RL Unpublished.
XX
RN [2]
RP 1-4222
RA Palacios G., Savji N., Shah A., Lipkin W.I.;
RT ;
RL Submitted (12-MAY-2011) to the INSDC.
RL Center for Infection and Immunity, Columbia University, 772 W 168th Street,
RL 17th Floor, New York, NY 10032, USA
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FH Key Location/Qualifiers
FH
FT source 1. .4222
FT /organism="Naples virus"
FT /segment="M"
FT /host="Homo sapiens"
FT /strain="Sabin"
FT /mol_type="genomic RNA"
FT /country="Italy"
FT /isolation_source="serum"
FT /collection_date="1944"
FT /note="serogroup: Naples"
FT /db_xref="taxon:1170423"
FT CDS 18. .3998
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="AFH89008.1"
FT /translation="MLNTKSIILITCLVQQVHLKYTIISEVTKGAREVSCYSSTTRLDQ
FT LLEAWENKSALMGLRKGNCKLGAMEQVDCNLDLMSNYVSNVYDNPHGLGAMMYNTDDDK
FT RIEVLNDQIPDSMIPGGHNCSLLERKPFWADLIPSKKENPRPSLISLVPTPRSDFKRKF
FT EEAEEEMKKIRKELQDERQAQLSVIEEGRKRMRDLEDKLMRQWNEEKQKKGLLEETLEK
FT ERQLKNKALLDAHNLDKQLKEKDREFKTAMEEHQNERHRINSNMIRPPITTPAAVILTS
FT LLSASVVLGFELENRNTNHALNRPGNGGYSISDNNLIEAKCMITYGNKCPSWEMQLDPV
FT SYPFFSSNFEKYSLLESISETSPIIGKFSEVCVLSNLPGAQKTCAKEASLIKKQCSDDM
FT RAYFYINSLGKLAIVTCPENNVLSQDCNFCLRKAKGEQYVYKPIQDGFCQNGGVSSVPS
FT IRYSKDICSIGPTKVKNCHKGTSRYERTAFISTGDKKVYLEEIKIRSRQEYEPDQFLCY
FT KVKDSSSSPLAYEKVQVSKCKGIETNSPKKCTGDEYFCSKYPCESTSPEANCFLRKHSA
FT ILEVNIGGMWIKPKCIGYEMALVKRVGLRSEDVSSKECATCLWECSSGYISITTHGPKI
FT SYATACSHGSCKSIVQNPSTSIRISYPGNSEIVGGDIGIHLTEDSSPINLHLKIHCSPK
FT DSCEVSDCIFCVHGLLNYQCHSVASALLLSTITASLIVLMIYMLSKTKFVMKKLIPIML
FT TPLCWCFVLLAWLTKSWKGKMRNAIQSANSTIGWTEREERIVAERPRSRNTVRYSFYGV
FT VILAMLESAFGCSESLIAESKVMQCNIANGKTSCRASGTIIMKLGPIGSEACLILKGLR
FT DSDKQYISVKTESSELICREGESFWTSLYTPVCLSSRRCHLMGECTGDLCLKWKSNKTS
FT LEFAGKTRSDVINENKCFEQSGGLGYGCFNVNPSCLYTHAYLKSVYRNGFRVFKCASWT
FT HRVKLTITTHSRTFPMTLAAMSTQPTDWGSIGLILDSEGISGTNSFSFMKHGLGSFAII
FT DEPYSMEPRKGFIGEVRCPTEEAAIKASTLCKTAPQLIEYQPEMDSAECTTNMIDPMSV
FT FNRGSLPQVREGMTFTQSMEKNTVQAMTTGEVHASIRIVLDDYEVEYLSSQVDCDATFK
FT NLTGCYSCDEGARVCMQIIAHGDTIFHFRNPDVSINILQKVNTNTLIYCSVVHFSKPVI
FT KEEGTYDCGAGEKPMILKGTLVAVSPHNDRLEQGGSSIVINPKGGGVDFLGWLSGFSSW
FT FGGPLKAILMVIGFLLLGLILFVTIAIGLKFALRQMIVKRMK"
XX
SQ Sequence 4222 BP; 1299 A; 778 C; 982 G; 1163 T; 0 other;
jf939844 Length: 4222 31-MAY-2013 Type: N Check: 9748 ..
1 acacaaagaa ggtgcttatg ttgaatacaa aatctataat tttaataacc
51 tgtctagtgc agcaggtcca tctgaaatac acgattattt cagaggtgac
101 taagggtgct agggaggtga gctgctatag ctcaacaacc agattagacc
151 agctcttgga ggcttgggag aataagagtg ccctaatggg acttagaaaa
201 ggcaattgca aacttggagc tatggagcag gtggattgta accttgatct
251 catgtcaaac tacgtctcta atgtctatga taatccacac ggtttaggag
301 caatgatgta caatacagat gatgataaga ggattgaggt tctaaatgac
351 cagattcctg attctatgat ccctggagga cacaattgta gtctgctaga
401 gagaaagcca ttctgggctg atctcatacc atcaaaaaag gagaatccca
451 ggccatctct gatttccctt gttccaactc caagaagtga tttcaaaagg
501 aaattcgaag aagctgaaga agaaatgaag aaaataagga aagaattaca
551 agatgagcgt caggcgcaat taagtgttat tgaagaaggc aggaaaagga
601 tgagggactt agaggacaaa cttatgaggc agtggaatga agaaaagcag
651 aagaagggac tgcttgagga aactttggag aaggaaaggc aactgaaaaa
701 caaggctctt cttgatgcac ataatctaga caagcagttg aaggaaaagg
751 acagagaatt taagacagcc atggaagagc atcagaatga gagacataga
801 atcaacagta atatgatcag acctcctatc accactcccg cagctgtgat
851 cttgacttct cttttatctg ccagtgtggt tctaggcttc gaattggaaa
901 ataggaacac taatcatgca ctaaacagac ctgggaatgg tggttactct
951 attagtgata acaatctgat agaggctaaa tgcatgatca cctatggcaa
1001 caagtgtccc tcctgggaaa tgcagttaga tcctgtgtca taccccttct
1051 tctcttccaa ttttgagaag tacagtctgc tagagtctat ttcagaaacc
1101 tcaccgataa tagggaagtt ctcagaagtc tgtgttctct caaacttacc
1151 tggagctcag aaaacatgtg ccaaagaagc aagcttaatc aagaagcaat
1201 gttctgatga catgagagcc tacttctaca ttaactcttt agggaaactt
1251 gcaattgtca catgtccaga gaataatgtt ttgtcacaag actgcaattt
1301 ctgtctacga aaagccaaag gagagcagta tgtttacaaa cccattcaag
1351 atggcttttg tcagaatgga ggtgtttctt ctgttcctag cattagatat
1401 tcaaaagata tctgctccat aggaccaaca aaggttaaaa attgtcacaa
1451 aggcacttct aggtacgaaa ggacagcatt catatccact ggagacaaaa
1501 aagtatattt ggaggaaatt aaaataagat ctaggcaaga gtatgagcct
1551 gatcagttct tatgctacaa ggtaaaggac agctcttcat cgcctcttgc
1601 ctacgagaag gtccaagtgt ccaaatgtaa aggcattgaa acaaacagcc
1651 ctaagaaatg cacaggagat gaatacttct gcagcaagta cccttgtgag
1701 tcaaccagcc ctgaggcaaa ctgtttcctc agaaagcaca gtgcaatact
1751 agaggtcaac atcgggggga tgtggattaa gccaaaatgt attggttatg
1801 agatggccct agttaagagg gttggtctca ggtctgaaga tgtctcatca
1851 aaggagtgtg ccacttgctt atgggagtgc tccagtggtt acataagcat
1901 caccacacat gggcctaaga tttcttatgc aactgcatgt agtcatggat
1951 cttgcaagag tattgttcaa aacccatcaa catccattag aattagttat
2001 ccaggaaaca gtgaaattgt cgggggtgac atagggatcc acttaactga
2051 ggactcatct cctatcaacc tccatctgaa gatccactgt tcacctaagg
2101 attcttgtga agtgagtgat tgcatttttt gcgttcatgg gttgctgaat
2151 tatcaatgtc attccgtggc ttctgctctc cttttgtcca ctatcacagc
2201 atctcttatt gtgttaatga tttacatgct ttctaaaact aagtttgtaa
2251 tgaaaaagct cataccaatt atgctcactc cgctctgctg gtgttttgta
2301 ctgctagctt ggttaactaa gtcttggaaa gggaaaatga ggaatgcaat
2351 tcagtcagct aactccacaa ttgggtggac agaacgtgaa gaaaggattg
2401 ttgcggaaag accaaggagc aggaataccg taaggtattc tttctatggg
2451 gttgttatac tagccatgtt agaatctgcc tttggctgct ctgaaagcct
2501 cattgcagag tcaaaagtaa tgcaatgcaa tattgcaaat gggaaaacaa
2551 gctgtagagc ctctgggaca attattatga aattagggcc gataggatca
2601 gaagcttgtc tgattctcaa gggacttagg gatagtgaca agcagtacat
2651 atctgtgaaa actgaatcta gtgagctgat ctgcagagaa ggagagtcat
2701 tctggacctc cttgtatact ccagtttgct taagctcaag gaggtgtcat
2751 ttaatgggag agtgtacagg agacttgtgc ttaaagtgga agtcaaacaa
2801 aacttcttta gagtttgctg gcaagacacg tagtgatgtc ataaatgaaa
2851 acaagtgttt tgagcagagt ggtgggctag gatatgggtg cttcaatgtc
2901 aacccttcat gtctctatac tcatgcttat ttgaagtcag tttacaggaa
2951 tggttttaga gtgttcaagt gtgcttcttg gactcataga gttaagttaa
3001 ccattaccac gcactctaga acattcccta tgaccctagc agcaatgagc
3051 actcaaccca cagactgggg ctcaattggt ctaattctcg actcagaggg
3101 gatctcaggg acaaattcct tttccttcat gaagcatggt ctagggagct
3151 tcgctataat agatgagccc tattcaatgg aacccaggaa ggggttcatt
3201 ggagaagtca ggtgtccaac agaagaagca gctataaaag cctctactct
3251 gtgtaagaca gctccccagt taatagaata ccaacctgaa atggacagtg
3301 ccgaatgcac cacaaatatg attgatccaa tgagcgtatt caacagaggc
3351 tcccttcccc aggttagaga aggaatgact tttactcagt ctatggagaa
3401 gaataccgtt caggccatga ccacagggga agttcatgct agcattagga
3451 tagttctcga cgactatgag gttgaatatc tttcaagtca ggttgattgt
3501 gatgctacat tcaaaaattt gactggttgc tattcatgcg atgagggtgc
3551 aagagtgtgt atgcagatta tagcacatgg ggatactata ttccacttta
3601 gaaatccaga tgtgagtata aatattctac aaaaggttaa tacaaacact
3651 ttgatttatt gctctgtagt gcacttttca aagcctgtta taaaagagga
3701 aggaacatat gattgtggag caggagagaa gccaatgatt ctcaagggga
3751 cattggtggc ggtttctcct cataatgaca gactggaaca gggaggttcc
3801 tcaattgtga ttaatccaaa agggggtgga gttgacttcc ttggctggct
3851 ttctggattt agctcttggt ttgggggacc tcttaaggct attttaatgg
3901 tcattggttt ccttctcctg ggcctcatct tgtttgtgac aattgcgatc
3951 ggccttaagt ttgcactcag acaaatgata gttaaaagga tgaaatgatt
4001 agcaaatgtg gtctggatcc tgtggctttg attagcaaat acagtctgga
4051 ttctatagtt taattagtgg gttcaactgg gggggtatgg gcagcagttc
4101 aatccagcag ttggactcac ctagtatgta gagcaaaatc atttaaaaga
4151 tcagctaaat tggtctattg attgcttgtt ttgcaatttg ttgttttatt
4201 aataaagcac cggtctttgt gt