Sequence of DPV Potato virus Y

Potato virus Y isolate CN1 coat protein gene, partial cds.

ACC No: JN034579

Dated: 2011-12-07 | Length: 801 | CRC: -21983245

                
ID   JN034579; SV 1; linear; genomic RNA; STD; VRL; 801 BP.
XX
AC   JN034579;
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DT   11-OCT-2011 (Rel. 110, Created)
DT   07-DEC-2011 (Rel. 111, Last updated, Version 2)
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DE   Potato virus Y isolate CN1 coat protein gene, partial cds.
XX
KW   .
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OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-801
RX   PUBMED; 21922324.
RA   Kehoe M.A., Jones R.A.;
RT   "A proposal to help resolve the disagreement between naming of potato virus
RT   Y strain groups defined by resistance phenotypes and those defined by
RT   sequencing";
RL   Arch. Virol. 156(12):2273-2278(2011).
XX
RN   [2]
RP   1-801
RA   Kehoe M.A., Jones R.A.C.;
RT   ;
RL   Submitted (27-MAY-2011) to the INSDC.
RL   Plant Virology, Department of Agriculture and Food WA, 3 Baron-Hay Court,
RL   South Perth, WA 6151, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .801
FT                   /organism="Potato virus Y"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="CN1"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia:Carnarvon"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .>801
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="UniProtKB/TrEMBL:G5CCV0"
FT                   /protein_id="AEQ16254.1"
FT                   /translation="ANDTIDAGENSKKDAKLEQGSIQPKPNKGKDKDVNAGTSGTHTVP
FT                   RIKAITSKMRMPKSKGAAALNLAHLLEYAPQQIDISNTRATQSQFDTWYEAVRTAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGSEQVEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLIRNLRDGSLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
XX
SQ   Sequence 801 BP; 276 A; 162 C; 196 G; 167 T; 0 other;

jn034579 Length: 801  07-DEC-2011  Type: N  Check: 2581  ..

       1  gcaaacgata caattgatgc tggagaaaac agtaagaaag atgcgaaact
      51  ggaacagggt agcatccagc caaagcctaa caagggaaaa gataaggatg
     101  taaatgccgg tacatctgga acacatactg taccaagaat aaaggctatt
     151  acgtcaaaaa tgagaatgcc caaaagcaaa ggagcggccg cgctaaactt
     201  agcacatttg ctcgaatatg ctccacaaca gatagatatc tcaaatactc
     251  gggcaactca atcacagttt gatacgtggt atgaagcagt gcggacggca
     301  tacgacatag gggaaactga aatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaatggaa cctcgccaaa tgtcaatgga gtttgggtta
     401  tgatggatgg aagtgagcaa gttgaatatc cgttgaaacc catcgttgag
     451  aatgcaaaac caacccttag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtac atagaaatgc gcaacaaaaa ggaaccatat atgccacgat
     551  atggtttaat tcgaaatctg cgggatggaa gtctagcgcg ctatgccttt
     601  gacttttatg aagtcacatc acgaacacca gtgagggcca gggaagcgca
     651  catacaaatg aaggccgcag cattaaaatc agcccaacct cgacttttcg
     701  ggttggatgg tggcatcagt acacaagagg agaacacaga gaggcacacc
     751  accgaggatg tttctccaag tatgcatact ctacttggag tcaagaacat
     801  g