Sequence of DPV Pennisetum mosaic virus
Pennisetum mosaic virus isolate CD9 polyprotein gene, partial cds.
ACC No: JN083849
Dated: 2013-06-04 | Length: 2135 | CRC: -6444012
ID JN083849; SV 1; linear; genomic RNA; STD; VRL; 2135 BP.
XX
AC JN083849;
XX
DT 04-JUN-2013 (Rel. 117, Created)
DT 04-JUN-2013 (Rel. 117, Last updated, Version 1)
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DE Pennisetum mosaic virus isolate CD9 polyprotein gene, partial cds.
XX
KW .
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OS Pennisetum mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-2135
RA Cui X.W., Gao B., Li X.D.;
RT "Sequencing and analysis of the 3'-terminal genome of Pennisetum mosaic
RT virus isolates from maize plants in Chengde";
RL Unpublished.
XX
RN [2]
RP 1-2135
RA Cui X.W., Gao B., Li X.D.;
RT ;
RL Submitted (06-JUN-2011) to the INSDC.
RL Plant Pathology, College of Plant Protection, Shandong Agricultural
RL University, Tai'an, Shandong 271018, China
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FH Key Location/Qualifiers
FH
FT source 1. .2135
FT /organism="Pennisetum mosaic virus"
FT /host="maize"
FT /isolate="CD9"
FT /mol_type="genomic RNA"
FT /country="China:Hebei"
FT /collection_date="Aug-2010"
FT /db_xref="taxon:221262"
FT CDS <1. .1894
FT /codon_start=2
FT /product="polyprotein"
FT /protein_id="AEK64758.1"
FT /translation="PLETLLGGKVCVDDFNNQFYAHHLIGPWTVGITKFYGGWNQLLEK
FT LPNGWVYCDADGSQFDSSLTPYLINAVLDIRLSFMEEWDIGERMLMNLYTEIVFTPIAT
FT PDGSVIKKFKGNNSGQPSTVVDNTLMVILAFNYTMLSCGIDSDMIDNVCKMFANGDDLL
FT LAVNPDYEYILDLFSNHFSDLGLNFDFSSRTKDKSELWFMSTRGIKYNEMYIPKLEKER
FT IVAILEWVRSKQPQHRLEAICASMIEAWGYPDLLHEIRKFYAWLLEMQPFADLAKEGLA
FT PYIAESALQNLYTGNGVNESEIERYFQQFKTDLQGYVEDYNEDVYHQSGRVDAGTPPQT
FT EEQKKAAEEQRQKAAADAEAKRKAAADKEARKAREAEAERKRQADAAAKGKQDKDVNVG
FT THGTIAVPKLKAMSSKMRLPLAKGKNILHVEFLLNYKPAQQDISNTRATRAEFDRWYDA
FT VKNEYEVDDTQMTVIMSGLMVWCIENGCSPNINGVWTMMDGEEQRTFPLKPVIENASPT
FT FRQIMHHFSDAAEAYIEFRNATERYMPRYGLQRNLTDYSLARYAFDFYEITSRTTARAK
FT EAHMQMKAAAVRGSNTRMFGLDGNVGESQENTERHTAGDVSRNMHSLLGVQQHH"
FT mat_peptide <1. .985
FT /product="NIb"
FT mat_peptide 986. .1891
FT /product="CP"
XX
SQ Sequence 2135 BP; 687 A; 381 C; 497 G; 570 T; 0 other;
jn083849 Length: 2135 04-JUN-2013 Type: N Check: 421 ..
1 tccactcgag acgctattag gaggaaaagt gtgtgttgac gatttcaaca
51 accaattcta cgcacaccat ttgatcggtc catggacagt cgggataaca
101 aaattttatg gaggctggaa ccaattgctc gagaaattgc cgaatggttg
151 ggtgtattgc gatgcggacg gatcacagtt tgatagttca ttaacaccat
201 atctaataaa tgcagtgtta gatattagac taagcttcat ggaagagtgg
251 gacattggtg agagaatgct tatgaacttg tacactgaga ttgttttcac
301 accaattgca acaccagacg gttcagtcat taagaagttt aaaggtaaca
351 atagtggaca gccgtcaaca gttgtggaca atacactaat ggttatatta
401 gcttttaatt acactatgtt atcttgtggt attgatagtg acatgattga
451 taatgtttgt aaaatgtttg ctaatggtga cgatttatta ctagctgtga
501 atcctgatta cgagtatata ttagatttgt ttagtaatca tttctccgat
551 ttgggtttga attttgattt tagttcacgt acaaaggaca aatcagaact
601 ttggttcatg tccactcgag gaattaaata caatgaaatg tacattccaa
651 aactcgagaa agaaagaata gttgcaattc ttgaatgggt tcgctcaaaa
701 cagccacagc atagacttga agccatttgc gcatcaatga ttgaagcatg
751 gggatatcca gatttactac acgaaattcg gaagttttat gcttggctat
801 tagagatgca accttttgct gatttggcga aagaaggatt ggcaccatac
851 attgcagaat cggcattaca aaatttgtat actggaaatg gtgttaatga
901 aagtgaaatt gaaagatatt tccaacaatt caagacagat ttacaaggat
951 atgttgagga ttataacgag gatgtttatc atcagagtgg tagagttgat
1001 gccggaactc ctccacagac agaagaacaa aagaaagctg ctgaagaaca
1051 gagacaaaaa gcagcagccg atgcagaagc aaagcgtaaa gcagcagctg
1101 ataaagaggc aagaaaagcg cgagaagctg aagcagaaag aaaacgacaa
1151 gcagatgctg ccgcaaaagg aaagcaggac aaagatgtca atgtgggaac
1201 acatggaact atagcagtac caaaattaaa ggctatgtcc tcgaaaatgc
1251 gcttaccgtt agccaagggg aaaaacatat tacatgtgga atttcttctt
1301 aactataaac cagctcaaca ggatatatcc aacacacgag caacccgagc
1351 tgagtttgat agatggtacg atgctgtcaa gaatgagtat gaagtagatg
1401 atacacaaat gacagtaatc atgagtggtt taatggtgtg gtgcatagaa
1451 aacggttgct cacctaatat aaatggagtg tggacaatga tggatggaga
1501 agaacaaaga actttcccac ttaaacctgt cattgagaat gcatcaccca
1551 cattccgaca gattatgcac cattttagtg atgcagctga agcctacata
1601 gaatttcgta atgcaacgga aagatatatg ccacgatatg gccttcagcg
1651 aaacttgacc gactatagct tggctcgtta tgcgtttgat ttctacgaga
1701 tcacatctcg aacaacagcg cgagctaagg aagcccacat gcagatgaaa
1751 gcagcagcag tgcgtggttc aaacacgcgc atgtttggct tggatgggaa
1801 tgtcggcgag tcccaggaga atacagaacg tcacactgct ggcgacgtta
1851 gtcgcaatat gcactccctt cttggggtgc agcagcacca ttgattcctg
1901 gaaaccctgt ttgcagtacc ttagtatttt tataattcta taaggataat
1951 gaggctctgc ctccacttta tatgctttta ttaagagtac tataagtccc
2001 ttgctattct gcaagacgtg tgaggctttg cctcttgtct tataggtttg
2051 agggatgtac tagcttcgaa ccactagacg gacacctgtt gagtggctat
2101 gctacgttgc agggttgcga gtttagtggc gagag