Sequence of DPV Tomato zonate spot virus

Tomato zonate spot virus isolate 11YV229 nucleocapsid protein (N) gene, complete cds.

ACC No: JN116580

Dated: 2011-11-20 | Length: 837 | CRC: -440234497

                
ID   JN116580; SV 1; linear; genomic RNA; STD; VRL; 837 BP.
XX
AC   JN116580;
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DT   20-NOV-2011 (Rel. 110, Created)
DT   20-NOV-2011 (Rel. 110, Last updated, Version 1)
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DE   Tomato zonate spot virus isolate 11YV229 nucleocapsid protein (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Tomato zonate spot virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-837
RA   Ding M., Yin Y.-Y., Zhang Z.-K.;
RT   "Molecular characterization of Tomato zonate spot virus in Yunnan";
RL   Unpublished.
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RN   [2]
RP   1-837
RA   Ding M., Yin Y.-Y., Zhang Z.-K.;
RT   ;
RL   Submitted (13-JUN-2011) to the INSDC.
RL   Institute of Biotechnology and Germplasm Resources, Yunnan Academy of
RL   Agricultural Sciences, Xueyun Road No. 9, Kunming, Yunnan 650223, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .837
FT                   /organism="Tomato zonate spot virus"
FT                   /host="Nicotiana tabacum"
FT                   /isolate="11YV229"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Yunnan, Gejiu"
FT                   /collection_date="01-Jun-2011"
FT                   /clone="229-2"
FT                   /db_xref="taxon:460926"
FT   gene            complement(1. .837)
FT                   /gene="N"
FT   CDS             complement(1. .837)
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AET42012.1"
FT                   /translation="MSNVRSLTQQKIQELLAGGKADVEIDTDDQTQGFSFASFYEENKA
FT                   KADFTYNTGINILKCRKQVFAACKNGKYEFCGHKIVASGADVSATDWTFKRTEAFIRTR
FT                   LISMAEHATDETTKKQMYIKAMELPLVAAYGLNVPVDFNSSAIRLMLCIGGPLPLLSGV
FT                   PGLAPVCFPLAYFQNVKKEQLGIKNFSTYEQICKVAKVLSAASVEFTEKTQELFTSTVK
FT                   LLGESNPGTAGAISLHKYNDQLKQMETAFKSKLNVDDFGQNSKQAPKKKSSNDLSF"
XX
SQ   Sequence 837 BP; 221 A; 183 C; 163 G; 270 T; 0 other;

jn116580 Length: 837  20-NOV-2011  Type: N  Check: 8058  ..

       1  ttaaaaagac agatcattgc tgctcttctt ctttggtgcc tgtttggaat
      51  tttgaccgaa gtcatcaaca ttcaacttag acttgaatgc agtctccatc
     101  tgcttcaatt gatcattgta tttgtggagg gaaattgctc ctgctgtacc
     151  tgggttgctc tctccaagca gcttcacagt gctagtaaaa agttcctgag
     201  ttttctcagt gaactccacg ctggcagcag aaagtacttt agcaactttg
     251  cagatctgct catatgttga gaaatttttg atgcctagct gctctttctt
     301  cacattctga aagtaagcca agggaaagca aactggtgct aacccaggaa
     351  caccggataa tagtggcaaa ggtcctccaa tacagagcat caatctaatg
     401  gctgatgaat tgaaatcaac tggtacattc aaaccgtatg cagcaactag
     451  tggtagttcc attgccttga tatacatttg tttttttgta gtctcatctg
     501  tagcatgttc ggccatgctg ataagtctgg tcctgatgaa ggcttcagtc
     551  cttttgaatg tccagtctgt agcagacaca tcagcaccac tagcaacaat
     601  tttgtgacca caaaactcat attttccatt tttgcatgca gcaaacactt
     651  gtttcctgca tttcagaata tttatgccag tgttgtaagt aaaatcagct
     701  ttagccttgt tctcctcata gaaagaggca aagctgaagc cttgggtttg
     751  gtcatctgta tctatttcaa catctgcctt ccctccagcc aatagttctt
     801  gaatcttttg ttgtgttaaa ctccggacgt tagacat