Sequence of DPV Zucchini lethal chlorosis virus
Zucchini lethal chlorosis virus isolate BR09z NSs non-structural protein (NSs) gene, complete cds.
ACC No: JN572104
Dated: 2012-03-16 | Length: 1404 | CRC: -2079239578
ID JN572104; SV 1; linear; genomic RNA; STD; VRL; 1404 BP.
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AC JN572104;
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DT 12-FEB-2012 (Rel. 111, Created)
DT 16-MAR-2012 (Rel. 112, Last updated, Version 3)
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DE Zucchini lethal chlorosis virus isolate BR09z NSs non-structural protein
DE (NSs) gene, complete cds.
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KW .
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OS Zucchini lethal chlorosis virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN [1]
RP 1-1404
RX PUBMED; 22187101.
RA Hallwass M., Leastro M.O., Lima M.F., Inoue-Nagata A.K., Resende R.O.;
RT "Sequence determination and analysis of the NSs genes of two tospoviruses";
RL Arch. Virol. 157(3):591-596(2012).
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RN [2]
RP 1-1404
RA Leastro M.O., Hallwass M., Lima M.F., Inoue-Nagata A.K., Resende R.O.;
RT ;
RL Submitted (10-AUG-2011) to the INSDC.
RL Cell Biology, University of Brasilia, Instituto de Ciencias Biologicas,
RL Campus Darcy Ribeiro, Asa Norte, Brasilia, Distrito Federal 70910-900,
RL Brazil
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FH Key Location/Qualifiers
FH
FT source 1. .1404
FT /organism="Zucchini lethal chlorosis virus"
FT /host="Cucurbita pepo"
FT /isolate="BR09z"
FT /mol_type="genomic RNA"
FT /country="Brazil"
FT /collected_by="Jorge A. M. Rezende"
FT /collection_date="Jul-1996"
FT /identified_by="Bezerra, I.C"
FT /note="acronym: ZLCV"
FT /db_xref="taxon:83872"
FT gene 1. .1404
FT /gene="NSs"
FT CDS 1. .1404
FT /codon_start=1
FT /gene="NSs"
FT /product="NSs non-structural protein"
FT /protein_id="AEZ65023.1"
FT /translation="MSSSMYDSIIQAKASVLGSTSSGKSVVDSYWIHNYTNGASLIQTQ
FT LYSDSRSKSSFNYTSKVGDLPNEEREILSQNAFIPIFDDIDFCITIDDESLDLSICSNT
FT VNTNGVKHQGHLKVLSSAQLDPIEHLMSRSDISSRFHLKEEDIIPKDRYIEAANRGSLS
FT CVKEQTYEVKVCHNQALGKVNVLSPNRNVHECLYSFKPNFNQVESNNRTVNSLAIKSLL
FT MSVKNEIMPNSQAFASISTDADFKVNFWLRIPRVLKQVNFQKLFKIAEDTSNKDFYLSI
FT ACIPSHSSVETALNVTIICKHLKPTPEILSFFELKMAFSDLKEPYSAVHDPSYSHRIAH
FT ALLETHTSFAQSLCDKLQEDVIIYSLNNHELFPMKLDVGGRTLNYSEDAYKRKYFISET
FT LECLPANMQTISYLESIQIPSWKIDFARGEIKISPRSPSFLKWLVKLDIDEIGRRRPRF
FT SEAHKSGSK"
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SQ Sequence 1404 BP; 433 A; 280 C; 253 G; 438 T; 0 other;
jn572104 Length: 1404 16-MAR-2012 Type: N Check: 4592 ..
1 atgtcttcaa gcatgtatga ctctatcatc caggcaaaag cttcagtctt
51 gggatcaaca tcttcgggta agtctgttgt agattcttat tggatccaca
101 actacacaaa tggtgcttct ttaattcaaa ctcaattata ttctgattca
151 aggagcaaaa gcagcttcaa ctatacctca aaagtgggtg atctccctaa
201 tgaagagaga gagatcctct ctcaaaatgc tttcatccct atttttgatg
251 atatagattt ctgtatcacc attgatgatg agtctttaga tctttcaatc
301 tgctccaaca ctgttaacac taatggagtg aagcatcagg gacaccttaa
351 agtcctttca tctgcacaac ttgatcccat cgagcatctg atgagccgat
401 ctgacatttc ttctagattt catctgaaag aagaggatat aatacctaag
451 gacaggtaca tagaagcagc taacagaggc tctctttctt gtgtcaagga
501 gcagacttat gaagttaaag tctgccacaa ccaagcttta gggaaagtga
551 atgttctttc tcctaacaga aatgttcatg aatgcctata cagcttcaaa
601 cccaacttca atcaagttga gagcaacaac aggactgtaa attctcttgc
651 aattaaatca cttcttatgt ctgtcaaaaa tgagataatg cctaactctc
701 aggcttttgc tagcatttcg actgatgctg atttcaaagt gaatttttgg
751 ctgagaatac ccagggtcct gaaacaagtt aatttccaga aattattcaa
801 aattgctgaa gacacctcaa acaaagattt ttatctgtca attgcttgta
851 tccctagcca cagcagtgtt gaaactgctt taaatgtaac gattatttgc
901 aagcatttga aaccgactcc agagattttg tctttttttg agctcaaaat
951 ggccttttct gacttgaagg aaccatacag tgctgttcat gatccttcat
1001 attcccatag aattgcccat gcactgcttg aaactcacac atcctttgca
1051 caatctcttt gtgataagct tcaggaagat gttataattt attctttaaa
1101 caaccatgag ctgtttccaa tgaagctgga tgttggtgga agaactttaa
1151 actactctga agatgcttat aaaaggaaat attttatctc agaaactcta
1201 gaatgccttc ctgctaacat gcagactata tcttatttgg agagcattca
1251 aattccctca tggaaaattg attttgccag aggagaaatt aagatttctc
1301 caaggtctcc ttcctttttg aagtggttgg taaagcttga tattgatgaa
1351 ataggcagga ggaggccaag gttttctgaa gcacacaaat ctggttcgaa
1401 atag