Sequence of DPV Plum pox virus

Plum pox virus isolate NY900157 polyprotein gene, partial cds.

ACC No: JN637987

Dated: 2012-01-31 | Length: 698 | CRC: -435440388

                
ID   JN637987; SV 1; linear; genomic RNA; STD; VRL; 698 BP.
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AC   JN637987;
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DT   31-JAN-2012 (Rel. 111, Created)
DT   31-JAN-2012 (Rel. 111, Last updated, Version 1)
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DE   Plum pox virus isolate NY900157 polyprotein gene, partial cds.
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KW   .
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OS   Plum pox virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-698
RA   Mavrodieva V.A., Williams K.L.;
RT   "Genetic Variability of Plum Pox Virus Isolates from the USA";
RL   Unpublished.
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RN   [2]
RP   1-698
RA   Williams K.L., Mavrodieva V.A.;
RT   ;
RL   Submitted (01-SEP-2011) to the INSDC.
RL   Center of Plant Health Science and Technology Beltsville Laboratory, USDA
RL   APHIS PPQ, Bldg 580, BARC-East, Beltsville, MD 20705, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .698
FT                   /organism="Plum pox virus"
FT                   /host="peach"
FT                   /strain="PPV-D"
FT                   /isolate="NY900157"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:New York"
FT                   /db_xref="taxon:12211"
FT   CDS             <1. .>698
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /note="contains partial P3, 6K1 and start of CI protein"
FT                   /protein_id="AEY82640.1"
FT                   /translation="LESQRWRKHIPKPFIPKDGADLGGRYDISVRSLLGNQYKRLRDVV
FT                   RRKRDDVVCYTHQSMGKLFCKAIGISTSFLPSTLKMLDMLIVFGLLLSIGATCNSMINE
FT                   HKHLKQLAADREDKKRFKRLQVLYTRLSEKVGCTPTADEFLEYVGGENPDLLKHAEDLI
FT                   GDGQVVVHQSKRDSQANLERVVAFVALVMMLFDSERSDGVYKILNKLKGIMGSVDQAVH
FT                   HQSLDDIEDI"
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SQ   Sequence 698 BP; 215 A; 139 C; 170 G; 174 T; 0 other;

jn637987 Length: 698  31-JAN-2012  Type: N  Check: 6098  ..

       1  tcttggaatc gcagcggtgg cgaaaacata taccaaaacc tttcatccca
      51  aaagacggcg cagatttagg aggcaggtac gacatctccg ttcggtcatt
     101  acttggcaac cagtacaaac gcctgagaga cgtagtccga cggaaaagag
     151  acgatgtggt ttgctataca caccagtcga tggggaagct attttgcaaa
     201  gccatcggaa tttccacaag ttttcttcca agcactctta aaatgcttga
     251  catgctcatc gtgttcggtc tcttgctttc aataggagcc acatgcaact
     301  caatgatcaa tgagcataaa catcttaagc aacttgccgc cgatcgggaa
     351  gataagaaaa gattcaaaag attgcaagtc ttatacacga ggttatcaga
     401  gaaagttggt tgcacaccaa cagcagatga attcctggag tatgtgggag
     451  gtgaaaaccc tgatttactg aaacatgcag aggatctaat tggggatggt
     501  caagttgttg ttcatcaaag caagagagac tcacaagcaa atttggaacg
     551  ggttgtagca tttgtagctc ttgttatgat gctgtttgac tcggagcgaa
     601  gtgacggcgt gtacaagatt ctcaataaac tcaaaggcat tatggggagt
     651  gtcgaccagg ctgttcatca tcagagcttg gacgatatag aagatata