Sequence of DPV Plum pox virus

Plum pox virus strain DF3 polyprotein gene, partial cds.

ACC No: JN655523

Dated: 2011-11-06 | Length: 836 | CRC: 581087572

                
ID   JN655523; SV 1; linear; genomic RNA; STD; VRL; 836 BP.
XX
AC   JN655523;
XX
DT   06-NOV-2011 (Rel. 110, Created)
DT   06-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Plum pox virus strain DF3 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Plum pox virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-836
RA   Fattouh F.A., Awad E.;
RT   "Evaluation of some molecular techniques";
RL   Unpublished.
XX
RN   [2]
RP   1-836
RA   Fattouh F.A., Awad E.;
RT   ;
RL   Submitted (10-AUG-2011) to the INSDC.
RL   Botany and Microbiology, Faculty of Science, Muhram Bek, Alexandria 21522,
RL   Egypt
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .836
FT                   /organism="Plum pox virus"
FT                   /host="peach; cultivar: Desert Red"
FT                   /strain="DF3"
FT                   /mol_type="genomic RNA"
FT                   /country="Egypt:Alexandria"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:12211"
FT   CDS             <1. .>836
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /note="contains P3, 6K1 and CI proteins"
FT                   /protein_id="AER41970.1"
FT                   /translation="YLQELEQAWKELSWSEKFSAILESQRWRKHIPKPFIPKDGADLGG
FT                   RYDISVRSLLGNQYKRLRDVVRRKRDDVVRYTHQSMGKLFCKAIGISTSFLPSTLKMLD
FT                   MLIVFGLLLSIGATCNSMINEHKHLKQLAADREDKKRFKRLQVLYTRLSEKVGCTPTAD
FT                   EFLEYVGGENPDLLKHAEDLIGDGQVVVHQSKRDSQANLKRVVAFVALVMMLFDSERSD
FT                   GVYKILNKLKGVMGSVDQTVHHQSLDDIEDILDEKKLTVDFVLQSNEVAPTVPFDS"
XX
SQ   Sequence 836 BP; 257 A; 168 C; 205 G; 206 T; 0 other;

jn655523 Length: 836  06-NOV-2011  Type: N  Check: 9579  ..

       1  ttatctccag gagttggagc aagcttggaa agagttaagc tggtcggaaa
      51  aattctctgc aatcttggaa tcgcagcggt ggcgaaaaca tataccaaaa
     101  cctttcatcc caaaagacgg cgcagattta ggaggcaggt acgacatctc
     151  cgttcggtca ttacttggca accagtacaa acgcctgaga gacgtagtcc
     201  gacggaaaag agacgatgtg gttcgttata cacaccagtc gatggggaag
     251  ctattttgca aagccatcgg aatttccaca agttttcttc caagcactct
     301  taaaatgctt gatatgctca tcgtgttcgg tctcttgctt tcaataggag
     351  ccacatgcaa ctcaatgatc aatgagcata aacatcttaa gcaacttgcc
     401  gccgatcggg aagataagaa aaggttcaaa agattgcaag tcctatacac
     451  gaggttatca gagaaggttg gatgcacacc aacagcagat gaattcctgg
     501  agtatgtggg aggtgaaaac cctgatttac tgaaacatgc agaggatcta
     551  attggggatg gtcaagttgt tgttcatcaa agcaagagag actcacaagc
     601  aaatttgaaa cgggttgtag catttgtagc tcttgttatg atgctgtttg
     651  actcggagcg aagtgacggc gtgtacaaga ttctcaataa actcaaaggc
     701  gtcatgggga gtgtcgacca gactgttcat caccagagct tggacgatat
     751  agaagatata ctggatgaga agaagctcac agtcgatttc gtgctgcaaa
     801  gtaacgaagt tgcaccaact gttccatttg actcaa