Sequence of DPV Narcissus latent virus
Narcissus latent virus isolate NL1_2 polyprotein gene, partial cds.
ACC No: JN662381
Dated: 2012-07-20 | Length: 1172 | CRC: -666744761
ID JN662381; SV 2; linear; genomic RNA; STD; VRL; 1172 BP.
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AC JN662381;
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DT 13-FEB-2012 (Rel. 111, Created)
DT 20-JUL-2012 (Rel. 113, Last updated, Version 2)
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DE Narcissus latent virus isolate NL1_2 polyprotein gene, partial cds.
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KW .
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OS Narcissus latent virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Macluravirus.
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RN [1]
RP 1-1172
RA Sochacki D., Berniak H., Komorowska B.;
RT "Molecular characterization of Polish isolates of Narcissus latent virus";
RL Unpublished.
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RN [2]
RP 1-1172
RA Sochacki D., Berniak H., Komorowska B.;
RT ;
RL Submitted (09-SEP-2011) to the INSDC.
RL Plant Protection, Research Institute of Horticulture, Konstytucji 3Maja
RL 1/3, Skierniewice, Lodzkie 96-100, Poland
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RN [3]
RC Sequence update by submitter
RP 1-1172
RA Sochacki D., Berniak H., Komorowska B.;
RT ;
RL Submitted (18-JUL-2012) to the INSDC.
RL Plant Protection, Research Institute of Horticulture, Konstytucji 3Maja
RL 1/3, Skierniewice, Lodzkie 96-100, Poland
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CC On Jul 18, 2012 this sequence version replaced gi:374921802.
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FH Key Location/Qualifiers
FH
FT source 1. .1172
FT /organism="Narcissus latent virus"
FT /host="Narcissus sp.; cultivar: Dutch Master"
FT /isolate="NL1_2"
FT /mol_type="genomic RNA"
FT /country="Poland"
FT /collection_date="13-Oct-2010"
FT /db_xref="taxon:48200"
FT CDS <1. .1071
FT /codon_start=1
FT /product="polyprotein"
FT /note="contains NIb-CP"
FT /db_xref="UniProtKB/TrEMBL:H6UM46"
FT /protein_id="AFA26131.2"
FT /translation="DVLLYAQENGLGSVCYMDPCQVFALHYGSSKGLEDVKFDNEDESA
FT DEDDGNITPDLELQMDVGNLIPEKEKNSQNVNTSDGGKNASNSATGESSKPPENNAGKG
FT ADQGDVDPPQGDPLVDDEVVEWVIPKMSPNIGTSLIPVINGKKLWKRGVLKSIPKMMFN
FT MTSTMATQAQLTSWVEEVKQALALKTDDAWTVVITNWCIWCANNGTSSEVDTSQTMEIR
FT DGFGKAQAIPIEVFVNPAVENGGLRKIMRHFSGITHEILKAGKRMTAWGNKRGFTEKSM
FT IPYAFDYYVVTNTTPKTVREQLAQSKAAAIGSGVTRKMVLDGNIQGSHASYERHVDTDN
FT SEYEHGNDVDQRPYLT"
FT mat_peptide <1. .177
FT /product="NIb"
FT mat_peptide 178. .1068
FT /product="coat protein"
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SQ Sequence 1172 BP; 328 A; 244 C; 311 G; 289 T; 0 other;
jn662381 Length: 1172 20-JUL-2012 Type: N Check: 2635 ..
1 gatgttctgc tgtacgcaca agagaacggt ctgggttcgg tttgttacat
51 ggacccgtgt caggtgtttg cgttgcacta tggctcttct aaaggcttag
101 aagatgtcaa gttcgacaat gaagatgaga gtgcggatga ggatgatggt
151 aacattacac ccgacctgga actccaaatg gacgttggca acctcattcc
201 tgagaaggag aagaattccc aaaatgtgaa tacaagtgat ggaggcaaga
251 acgccagcaa ctctgccaca ggcgagtcaa gtaaacctcc tgagaataac
301 gcagggaagg gcgctgatca aggtgatgtg gatccaccac agggtgaccc
351 cttagttgat gatgaggtgg ttgagtgggt cattccaaaa atgagcccaa
401 acattggaac ttcactgata ccggtcatca acgggaagaa gttgtggaag
451 cgaggagtat tgaagagcat acccaaaatg atgttcaaca tgacttcaac
501 catggcaact caagcccaac tcacctcatg ggtggaggag gtgaagcaag
551 cgcttgcgct taaaacagac gatgcatgga cggttgtcat cacgaattgg
601 tgcatttggt gcgctaacaa cggcacatcg tctgaagttg atacgtcgca
651 aactatggag attcgcgatg gtttcgggaa ggctcaggct atccccattg
701 aggtttttgt gaacccagct gtcgaaaatg gcggtttacg aaagataatg
751 aggcacttct ctggcataac tcacgagatt ttaaaggctg gtaagcgaat
801 gacagcctgg ggaaataaga ggggctttac tgagaaatca atgatcccct
851 acgcttttga ttactatgtt gtcacaaaca caacgcccaa gactgtgcgc
901 gagcaattgg cgcagtcgaa ggcagcagca attggttcag gtgtgacgag
951 gaagatggtt cttgatggga acatacaagg gtctcatgcc agttacgaac
1001 gccatgtcga tacggacaac agcgagtacg agcatggcaa tgatgttgat
1051 caaaggccct atcttacttg aattctgcgt tcttgaacgc ttgaattcaa
1101 ctatttgcat tcgctcttta taagttttct cttaagctta tttcctttct
1151 ctctctcttg agcgttaagg gt