Sequence of DPV Narcissus latent virus
Narcissus latent virus isolate NL1_7 polyprotein gene, partial cds.
ACC No: JN662382
Dated: 2012-07-20 | Length: 1125 | CRC: -1565871357
ID JN662382; SV 2; linear; genomic RNA; STD; VRL; 1125 BP.
XX
AC JN662382;
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DT 13-FEB-2012 (Rel. 111, Created)
DT 20-JUL-2012 (Rel. 113, Last updated, Version 2)
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DE Narcissus latent virus isolate NL1_7 polyprotein gene, partial cds.
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KW .
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OS Narcissus latent virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Macluravirus.
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RN [1]
RP 1-1125
RA Sochacki D., Berniak H., Komorowska B.;
RT "Molecular characterization of Polish isolates of Narcissus latent virus";
RL Unpublished.
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RN [2]
RP 1-1125
RA Sochacki D., Berniak H., Komorowska B.;
RT ;
RL Submitted (09-SEP-2011) to the INSDC.
RL Plant Protection, Research Institute of Horticulture, Konstytucji 3Maja
RL 1/3, Skierniewice, Lodzkie 96-100, Poland
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RN [3]
RC Sequence update by submitter
RP 1-1125
RA Sochacki D., Berniak H., Komorowska B.;
RT ;
RL Submitted (18-JUL-2012) to the INSDC.
RL Plant Protection, Research Institute of Horticulture, Konstytucji 3Maja
RL 1/3, Skierniewice, Lodzkie 96-100, Poland
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CC On Jul 18, 2012 this sequence version replaced gi:374921804.
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FH Key Location/Qualifiers
FH
FT source 1. .1125
FT /organism="Narcissus latent virus"
FT /host="Narcissus sp.; cultivar: Dutch Master"
FT /isolate="NL1_7"
FT /mol_type="genomic RNA"
FT /country="Poland"
FT /collection_date="14-Oct-2010"
FT /db_xref="taxon:48200"
FT CDS <1. .1065
FT /codon_start=1
FT /product="polyprotein"
FT /note="contains NIb-CP"
FT /db_xref="UniProtKB/TrEMBL:H6UM47"
FT /protein_id="AFA26132.2"
FT /translation="LLYAQENGLGSVCYMDPCQVFALHYGSSKGLEDVKFDNEDESADE
FT DDGNITPDLELQMDVGNLIPEKEKNSQNVNTSDGGKNASNSATGESSKPPENNAGKGAD
FT QGDVDPPQGDPLVDDEVVEWVIPKMSPNIGTSPIPVINGKKLWKRGVLKSIPKMMFNTT
FT STMATQAQLTSWVEEVKQALALKTDDAWTVVITNWCIWCANNGTSSEVDTSQTMEIRDG
FT FGKAQAIPIEVFVNPAVENGGLRKIMRHFSGITHEILKAGKRMTAWGNKRGFTEKSMIP
FT YAFDYYVVTNTTPKTVREQLAQSKAAAIGSGVTRKMVLDGNIQGSHASYERHVDTDNSE
FT YEHGNDVDQRPYLT"
FT mat_peptide <1. .171
FT /product="NIb"
FT mat_peptide 172. .1062
FT /product="coat protein"
FT 3'UTR 1066. .>1125
XX
SQ Sequence 1125 BP; 322 A; 236 C; 301 G; 266 T; 0 other;
jn662382 Length: 1125 20-JUL-2012 Type: N Check: 7267 ..
1 ctgctgtacg cacaagagaa cggtctgggt tcggtttgtt acatggaccc
51 gtgtcaggtg tttgcgttgc actatggctc ttctaaaggc ttagaagatg
101 tcaagttcga caatgaagat gagagtgcgg atgaggatga tggtaacatt
151 acacccgacc tggaactcca aatggacgtt ggcaacctca ttcctgagaa
201 ggagaagaat tcccaaaatg tgaatacaag tgatggaggc aagaacgcca
251 gcaactctgc cacaggcgag tcaagtaaac ctcctgagaa taacgcaggg
301 aagggcgctg atcaaggtga tgtggatcca ccacagggtg accccttagt
351 tgatgatgag gtggttgagt gggtcattcc aaaaatgagc ccaaacattg
401 gaacttcacc gataccggtc atcaacggga agaagttgtg gaagcgagga
451 gtattgaaga gcatacccaa aatgatgttc aacacgactt caaccatggc
501 aactcaagcc caactcacct catgggtgga ggaggtgaag caagcgcttg
551 cgcttaaaac agacgatgca tggacggttg tcatcacgaa ttggtgcatt
601 tggtgcgcta acaacggcac atcgtctgaa gttgatacgt cacaaactat
651 ggagattcgc gatggttttg ggaaggctca ggctatcccc attgaggttt
701 ttgtgaaccc agctgttgaa aatggcggtt tacgaaagat aatgaggcac
751 ttctctggca taactcacga gattttaaag gctggtaagc gaatgacagc
801 ctggggaaat aagaggggct ttactgagaa atcaatgatc ccctacgctt
851 ttgattacta tgttgtcaca aacacaacgc ccaagactgt gcgcgagcaa
901 ttggcgcagt cgaaggcagc agcaattggt tcaggtgtga cgaggaagat
951 ggttcttgat gggaacatac aagggtctca cgccagttac gaacgccatg
1001 tcgatacgga caacagcgag tacgagcatg gcaatgatgt tgatcaaagg
1051 ccctatctta cttgaattct gcgttcttga acgcttgaat tcaactattt
1101 gcattcgctc tttataagtt ttctc