Sequence of DPV Narcissus latent virus
Narcissus latent virus isolate NL1_14 polyprotein gene, partial cds.
ACC No: JN662383
Dated: 2012-07-20 | Length: 1172 | CRC: -770397790
ID JN662383; SV 2; linear; genomic RNA; STD; VRL; 1172 BP.
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AC JN662383;
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DT 13-FEB-2012 (Rel. 111, Created)
DT 20-JUL-2012 (Rel. 113, Last updated, Version 2)
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DE Narcissus latent virus isolate NL1_14 polyprotein gene, partial cds.
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KW .
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OS Narcissus latent virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Macluravirus.
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RN [1]
RP 1-1172
RA Sochacki D., Berniak H., Komorowska B.;
RT "Molecular characterization of Polish isolates of Narcissus latent virus";
RL Unpublished.
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RN [2]
RP 1-1172
RA Sochacki D., Berniak H., Komorowska B.;
RT ;
RL Submitted (09-SEP-2011) to the INSDC.
RL Plant Protection, Research Institute of Horticulture, Konstytucji 3Maja
RL 1/3, Skierniewice, Lodzkie 96-100, Poland
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RN [3]
RC Sequence update by submitter
RP 1-1172
RA Sochacki D., Berniak H., Komorowska B.;
RT ;
RL Submitted (18-JUL-2012) to the INSDC.
RL Plant Protection, Research Institute of Horticulture, Konstytucji 3Maja
RL 1/3, Skierniewice, Lodzkie 96-100, Poland
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CC On Jul 18, 2012 this sequence version replaced gi:374921806.
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FH Key Location/Qualifiers
FH
FT source 1. .1172
FT /organism="Narcissus latent virus"
FT /host="Narcissus sp.; cultivar: Carlton"
FT /isolate="NL1_14"
FT /mol_type="genomic RNA"
FT /country="Poland"
FT /collection_date="14-Oct-2010"
FT /db_xref="taxon:48200"
FT CDS <1. .1071
FT /codon_start=1
FT /product="polyprotein"
FT /note="contains NIb-CP"
FT /db_xref="UniProtKB/TrEMBL:H6UM48"
FT /protein_id="AFA26133.2"
FT /translation="DVLLYAQENGLGSVCYMDPCQVFALHYGSSKGLEDVKFDNEDESA
FT DEDDGNITPDLELQMDVGNLIPEKEKNSQNVNTSDGGKNASNSATGESSKPPENNAGKG
FT ADQGDVDPPQGDPLVDDEVVEWVIPKMSPNIGTSPIPVINGKKLWKRGVLKSIPKMMFN
FT TTSTMATQAQLTSWVEEVKQALALKTDDAWTVVITNWCIWCANNGTSSEVDTSQTMEIR
FT DGFGKVQAIPIEVFVNPAVENGGLRKIMRHFSGITHEILKAGKRMTAWGNKRGFTEKSM
FT IPYAFDYYVVTNTTPKTVREQLAQSKAAAIGSGVTRKMVLDGNIQGSHASYERHVDTDN
FT SEYEHGNDVDQRPYLT"
FT mat_peptide <1. .177
FT /product="NIb"
FT mat_peptide 178. .1068
FT /product="coat protein"
FT 3'UTR 1072. .>1172
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SQ Sequence 1172 BP; 329 A; 244 C; 310 G; 289 T; 0 other;
jn662383 Length: 1172 20-JUL-2012 Type: N Check: 3172 ..
1 gatgttctgc tgtacgcaca agagaacggt ctgggttcgg tttgttacat
51 ggacccgtgt caggtgtttg cgttgcacta tggctcttct aaaggcttag
101 aagatgtcaa gttcgacaat gaagatgaga gtgcggatga ggatgatggt
151 aacattacac ccgacctgga actccaaatg gacgttggca acctcattcc
201 tgagaaggag aagaattccc aaaatgtgaa tacaagtgat ggaggcaaga
251 acgccagcaa ctctgccaca ggcgagtcaa gtaaacctcc tgagaataac
301 gcagggaagg gcgctgatca aggtgatgtg gatccaccac agggtgaccc
351 cttagttgat gatgaggtgg ttgagtgggt cattccaaaa atgagcccaa
401 acattggaac ttcaccgata ccggtcatca acgggaagaa gttgtggaag
451 cgaggagtat tgaagagcat acccaaaatg atgttcaaca cgacttcaac
501 catggcaact caagcccaac tcacctcatg ggtggaggag gtgaagcaag
551 cgcttgcgct taaaacagac gatgcatgga cggttgtcat cacgaattgg
601 tgcatttggt gcgctaacaa cggcacatcg tctgaagttg atacgtcaca
651 aactatggag attcgcgatg gttttgggaa ggttcaggct atccccattg
701 aggtttttgt gaacccagct gttgaaaatg gcggtttacg aaagataatg
751 aggcacttct ctggcataac tcacgagatt ttaaaggctg gtaagcgaat
801 gacagcctgg ggaaataaga ggggctttac tgagaaatca atgatcccct
851 acgcttttga ttactatgtt gtcacaaaca caacgcccaa gactgtgcgc
901 gagcaattgg cgcagtcgaa ggcagcagca attggttcag gtgtgacgag
951 gaagatggtt cttgatggga acatacaagg gtctcacgcc agttacgaac
1001 gccatgtcga tacggacaac agcgagtacg agcatggcaa tgatgttgat
1051 caaaggccct atcttacttg aattctgcgt tcttgaacgc ttgaattcaa
1101 ctatttgcat tcgctcttta taagttttct cctaagctta tttcctttct
1151 ctctttcttg agcgttaagg gt