Sequence of DPV Narcissus latent virus

Narcissus latent virus isolate IH11 coat protein gene, partial cds.

ACC No: JN662387

Dated: 2012-07-20 | Length: 894 | CRC: 2082205391

                
ID   JN662387; SV 1; linear; genomic RNA; STD; VRL; 894 BP.
XX
AC   JN662387;
XX
DT   13-FEB-2012 (Rel. 111, Created)
DT   20-JUL-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Narcissus latent virus isolate IH11 coat protein gene, partial cds.
XX
KW   .
XX
OS   Narcissus latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Macluravirus.
XX
RN   [1]
RP   1-894
RA   Sochacki D., Berniak H., Komorowska B.;
RT   "Molecular characterization of Polish isolates of Narcissus latent virus";
RL   Unpublished.
XX
RN   [2]
RP   1-894
RA   Sochacki D., Berniak H., Komorowska B.;
RT   ;
RL   Submitted (09-SEP-2011) to the INSDC.
RL   Plant Protection, Research Institute of Horticulture, Konstytucji 3Maja
RL   1/3, Skierniewice, Lodzkie 96-100, Poland
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .894
FT                   /organism="Narcissus latent virus"
FT                   /host="Narcissus sp.; cultivar: Dutch Master"
FT                   /isolate="IH11"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /collection_date="19-May-2011"
FT                   /db_xref="taxon:48200"
FT   CDS             <1. .894
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:H6UM52"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:H6UM52"
FT                   /protein_id="AFA26137.1"
FT                   /translation="MDVGNLIPEKEKNSQNVNTSDGGKNASNSATGESSKPPENNAGKG
FT                   ADQGDVDPPQGDPLVDDEVVEWVIPKMSPNIGTSPIPVINGKKLWKRGVLKSIPKMMFN
FT                   TTSTMATQAQLTSWVEEVKQALALKTDDAWTVVITNWCIWCANNGTSSEVDTSQTMEIR
FT                   DGFGKAQAIPIEVFVNPAVENGGLRKIMRHFSGITHEILKAGKRMTAWGNKRGFTEKSM
FT                   IPYAFDYYVVTNTTPKTVREQLAQSKAAAIGSGVTRKMVLDGNIQGSHASYERHVDTDN
FT                   SEYEHGNDVDQRPYLT"
XX
SQ   Sequence 894 BP; 266 A; 188 C; 244 G; 196 T; 0 other;

jn662387 Length: 894  20-JUL-2012  Type: N  Check: 9287  ..

       1  atggacgttg gcaacctcat tcctgagaag gagaagaatt cccaaaatgt
      51  gaatacaagt gatggaggca agaacgccag caactctgcc acaggcgagt
     101  caagtaaacc tcctgagaat aacgcaggga agggcgctga tcaaggtgat
     151  gtggatccac cacagggtga ccccttagtt gatgatgagg tggttgagtg
     201  ggtcattcca aaaatgagcc caaacattgg aacttcaccg ataccggtca
     251  tcaacgggaa gaagttgtgg aagcgaggag tattgaagag catacccaaa
     301  atgatgttca acacgacttc aaccatggca actcaagccc aactcacctc
     351  atgggtggag gaggtgaagc aagcgcttgc gcttaaaaca gacgatgcat
     401  ggacggttgt catcacgaat tggtgcattt ggtgcgctaa caacggcaca
     451  tcgtctgaag ttgatacgtc acaaactatg gagattcgcg atggttttgg
     501  gaaggctcag gctatcccca ttgaggtttt tgtgaaccca gctgttgaaa
     551  atggcggttt acgaaagata atgaggcact tctctggcat aactcacgag
     601  attttaaagg ctggtaagcg aatgacagcc tggggaaata agaggggctt
     651  tactgagaaa tcaatgatcc cctacgcttt tgattactat gttgtcacaa
     701  acacaacgcc caagactgtg cgcgagcaat tggcgcagtc gaaggcagca
     751  gcaattggtt caggtgtgac gaggaagatg gttcttgatg ggaacataca
     801  agggtctcac gccagttatg aacgccatgt cgatacggac aacagcgagt
     851  acgagcatgg caatgatgtt gatcaaaggc cctatcttac ttga