Sequence of DPV Groundnut bud necrosis virus

Groundnut bud necrosis virus isolate Tom_KNP nonstructural movement protein (NSm) gene, complete cds.

ACC No: JN662497

Dated: 2011-12-13 | Length: 924 | CRC: 1601801815

                
ID   JN662497; SV 1; linear; genomic RNA; STD; VRL; 924 BP.
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AC   JN662497;
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DT   13-DEC-2011 (Rel. 111, Created)
DT   13-DEC-2011 (Rel. 111, Last updated, Version 1)
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DE   Groundnut bud necrosis virus isolate Tom_KNP nonstructural movement protein
DE   (NSm) gene, complete cds.
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KW   .
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OS   Groundnut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-924
RA   Akram M., Naimuddin;
RT   "Genetic diversity in GBNV isolates infecting fabaceous and solanaceous
RT   crops";
RL   Unpublished.
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RN   [2]
RP   1-924
RA   Akram M., Naimuddin;
RT   ;
RL   Submitted (10-SEP-2011) to the INSDC.
RL   Division of Crop Protection, Indian Institute of Pulses Research,
RL   Kalyanpur, Kanpur, UP 2080 024, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .924
FT                   /organism="Groundnut bud necrosis virus"
FT                   /host="Solanum lycopersicum (tomato)"
FT                   /isolate="Tom_KNP"
FT                   /serotype="IV"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /isolation_source="leaves"
FT                   /collection_date="2010"
FT                   /note="serogroup: WSMoV"
FT                   /db_xref="taxon:198612"
FT   gene            1. .924
FT                   /gene="NSm"
FT   CDS             1. .924
FT                   /codon_start=1
FT                   /gene="NSm"
FT                   /product="nonstructural movement protein"
FT                   /protein_id="AEV56466.1"
FT                   /translation="MSRLSNVLESFRPSNSSNKELVPAVKKENNRSILARNVSKKDVDS
FT                   AIMNKAKTLNGKQYVSSGDSSVLGTYSSESAVEATSDDILSRLVVEQSTHLSNWKNDSL
FT                   VGNGNDKVSFTISIMPTWNSNRKYMHISRLIIWVVPTIPDSKNNVKASLIDPNKMTKEE
FT                   KIIISRQASLKDPMCFIFHLNWSFPKERNTPKQCMQLNLTSDEKYAKGVSFASVMYSWV
FT                   KNFCDTPIAAENNTCDVVPINRAKVIQSAALIEACKLMIPKGTGGKQISNQIKSLQKAA
FT                   ERLALEAENGDESLDVDIEMDNLLEI"
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SQ   Sequence 924 BP; 324 A; 163 C; 186 G; 251 T; 0 other;

jn662497 Length: 924  13-DEC-2011  Type: N  Check: 8597  ..

       1  atgtctcgct tgtctaacgt cttagaatct ttccgtcctt caaacagctc
      51  aaacaaagag ctagtgcctg cagttaaaaa ggaaaacaac agaagcattt
     101  tggcaagaaa tgtttccaaa aaagatgttg acagtgctat catgaacaaa
     151  gcaaaaacat tgaatgggaa acagtatgtt tctagtggag attccagtgt
     201  actgggcaca tactctagtg agtcagctgt ggaagctact tctgatgata
     251  ttctgtccag gcttgttgtt gagcaaagta ctcatctgag taactggaaa
     301  aatgattcac tcgtaggcaa tggaaatgac aaagttagct ttaccataag
     351  cataatgcct acatggaaca gtaacaggaa gtatatgcat atatcaaggc
     401  ttataatctg ggttgtgcca actatccctg attcaaaaaa caatgtcaag
     451  gcctccttaa ttgatccaaa caaaatgact aaagaggaga agataattat
     501  cagcagacaa gcctcattaa aggatcctat gtgttttatt ttccatctaa
     551  attggtcatt tccaaaagag agaaatactc caaaacaatg catgcagctc
     601  aacttaacca gtgatgaaaa atatgccaaa ggagtcagct ttgcttcagt
     651  catgtattca tgggttaaga acttctgcga tactcctata gctgctgaaa
     701  ataacacatg tgatgtagtt cccattaata gagccaaggt tattcaatct
     751  gctgctctaa ttgaagcatg caagttaatg atacctaaag gaactggtgg
     801  gaaacagata tccaatcaaa tcaagagtct gcagaaagct gctgaaaggc
     851  tagcattaga agctgaaaat ggtgatgaga gcttagatgt tgatattgag
     901  atggataatc ttcttgaaat ataa