Sequence of DPV Dasheen mosaic virus

Dasheen mosaic virus isolate JH coat protein (cp) mRNA, partial cds.

ACC No: JN692173

Dated: 2012-02-14 | Length: 987 | CRC: -1223759990

                
ID   JN692173; SV 1; linear; mRNA; STD; VRL; 987 BP.
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AC   JN692173;
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DT   14-FEB-2012 (Rel. 111, Created)
DT   14-FEB-2012 (Rel. 111, Last updated, Version 1)
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DE   Dasheen mosaic virus isolate JH coat protein (cp) mRNA, partial cds.
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KW   .
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OS   Dasheen mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-987
RA   Shiming S., Ni H.;
RT   "The detection of Dasheen mosaic virus in taro by RT-PCR and sequence
RT   analysis of its coat protein gene";
RL   Unpublished.
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RN   [2]
RP   1-987
RA   Shiming S., Ni H.;
RT   ;
RL   Submitted (17-SEP-2011) to the INSDC.
RL   College of Plant science & Technology, Huazhong Agricultural University,
RL   Huazhong Agricultural University,Wuhan China, Wuhan, Hubei 430070, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .987
FT                   /organism="Dasheen mosaic virus"
FT                   /host="taro"
FT                   /isolate="JH"
FT                   /mol_type="mRNA"
FT                   /country="China"
FT                   /collection_date="2011"
FT                   /db_xref="taxon:29271"
FT   gene            <1. .>987
FT                   /gene="cp"
FT   CDS             <1. .>987
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="AFA28134.1"
FT                   /translation="ADDTVDAGNQNNTNKTTPAAGGGNNTNTNTNTGNNTNTNTSTGNN
FT                   TNTNTNTNTNTTDNTNKTPAPPAPKASETPANKQVVPAVSEKGKEIVKDVNAGTSGTYS
FT                   VPRLNKITNKMNLPLVKGKCILNLNHLIEYKPEQRDIFNTRATHTQFEVWYNAVKREYE
FT                   LEDEQMHIVMNGFMVWCIDNGTSPDINGAWVMMDGNDQIEYPLKPIVENAKPTLRQIMH
FT                   HFSDAAEAYIELRNAEKPYMPRYGLIRNLRDASLARYAFDFYEVNSKTPVRAREAVAQM
FT                   KAAALSNVTTRLFGLDGNVSTSSENTERHTAKDVTPNMHTLLGVASPQ"
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SQ   Sequence 987 BP; 338 A; 224 C; 208 G; 217 T; 0 other;

jn692173 Length: 987  14-FEB-2012  Type: N  Check: 637  ..

       1  gcagatgata cagttgatgc agggaatcag aacaacacta ataaaacaac
      51  ccctgcagct ggtggtggta ataatacaaa caccaatacc aatactggta
     101  acaacacaaa taccaacacc agtactggta ataatacaaa caccaacacc
     151  aacactaaca ccaacacaac agataacacc aacaaaacac cagctccacc
     201  tgcaccaaaa gcttcagaga caccagccaa caagcaagta gttcctgcag
     251  taagtgagaa aggaaaggaa atcgtcaaag atgtcaacgc cggcacgagt
     301  ggcacatatt ctgtacctcg attaaataaa atcacaaaca aaatgaactt
     351  acctttagtc aaaggtaagt gcattttaaa tttgaatcat ttaatcgagt
     401  acaaacccga gcagcgcgac atcttcaaca ctagagctac ccacacacag
     451  tttgaggtct ggtataatgc tgtcaagagg gagtatgagc tcgaagatga
     501  gcagatgcac attgttatga acggtttcat ggtttggtgc atcgataatg
     551  gaacatcacc cgatattaac ggggcttggg tgatgatgga tggaaatgat
     601  caaattgaat acccgttaaa accaatcgtg gaaaatgcaa aacccacctt
     651  gcgtcagatt atgcatcact tttctgacgc agcagaggcc tatattgaat
     701  tgagaaatgc ggagaaaccg tacatgccta ggtacggtct tattcgtaac
     751  ttacgtgatg caagtcttgc ccgatatgct ttcgacttct atgaggtcaa
     801  ttcaaagaca ccggtgcgag caagggaggc agttgcgcag atgaaggccg
     851  ctgcactctc taacgttacc actaggctgt ttggattaga tggtaacgtt
     901  tcaacttcaa gcgagaacac tgaaaggcac actgcaaagg atgtcacacc
     951  aaatatgcac actttgcttg gtgtagcgtc tccgcag