Sequence of DPV Potato virus Y

Potato virus Y isolate YL coat protein gene, partial cds.

ACC No: JN711118

Dated: 2012-11-09 | Length: 801 | CRC: -1460804916

                
ID   JN711118; SV 1; linear; genomic RNA; STD; VRL; 801 BP.
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AC   JN711118;
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DT   05-DEC-2011 (Rel. 111, Created)
DT   09-NOV-2012 (Rel. 114, Last updated, Version 2)
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DE   Potato virus Y isolate YL coat protein gene, partial cds.
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KW   .
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OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-801
RX   PUBMED; 22484613.
RA   Dai J., Cheng J., Huang T., Zheng X., Wu Y.;
RT   "A multiplex reverse transcription PCR assay for simultaneous detection of
RT   five tobacco viruses in tobacco plants";
RL   J. Virol. Methods 183(1):57-62(2012).
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RN   [2]
RP   1-801
RA   Jin D.;
RT   ;
RL   Submitted (22-SEP-2011) to the INSDC.
RL   College of Plant Protection, Northwest A&F University, Taicheng Road 22,
RL   Xian, Shaanxi 712100, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .801
FT                   /organism="Potato virus Y"
FT                   /host="tobacco"
FT                   /isolate="YL"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="02-Aug-2010"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .>801
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /protein_id="AEU12507.1"
FT                   /translation="ANDTIDAGGSNKKDAKPEQGSIQPNPNKGKDKDVNVGTSGTHTVP
FT                   RIKAITSKMRMPKSKGETVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVRMAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGDEQVEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLIRNLRDVGLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
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SQ   Sequence 801 BP; 272 A; 163 C; 199 G; 167 T; 0 other;

jn711118 Length: 801  09-NOV-2012  Type: N  Check: 2096  ..

       1  gcaaatgaca caattgatgc aggaggaagc aacaagaaag atgcaaaacc
      51  agagcaaggc agcatccagc caaacccgaa caaaggaaaa gataaggatg
     101  tgaatgttgg tacatctggg acacatactg tgccgagaat caaggctatc
     151  acgtccaaaa tgagaatgcc caaaagcaag ggagaaaccg tgctaaactt
     201  agaacacttg ctcgagtatg ctccacaaca aattgatatt tcaaatactc
     251  gggcaactca atcacagttt gatacgtggt atgaagcagt gcggatggca
     301  tacgacatag gagaaactga gatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatc gaaaatggaa cctcgccaaa tgtcaacgga gtttgggtta
     401  tgatggatgg ggatgaacaa gttgaatacc cgttgaaacc aatcgttgag
     451  aatgcaaaac caacccttag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaataaaaa ggaaccatat atgccacgat
     551  atggtttaat tcgaaatctg cgggatgtag gtttagcgcg ctatgccttt
     601  gacttttatg aggtcacatc acgaacacca gtgagggcta gggaagcgca
     651  cattcaaatg aaggccgcag cattgaaatc agcccaacct cgacttttcg
     701  ggttggacgg tggcatcagt acacaagagg agaacacaga gaggcacacc
     751  accgaggatg tctctccaag tatgcatact ctacttggag tcaagaacat
     801  g