Sequence of DPV Croton yellow vein mosaic virus
Croton yellow vein mosaic virus isolate CYVMV-Bang-Cr2 from India, complete genome.
ACC No: JN831446
Dated: 2012-01-29 | Length: 2757 | CRC: 654735303
ID JN831446; SV 1; circular; genomic DNA; STD; VRL; 2757 BP.
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AC JN831446;
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DT 29-JAN-2012 (Rel. 111, Created)
DT 29-JAN-2012 (Rel. 111, Last updated, Version 1)
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DE Croton yellow vein mosaic virus isolate CYVMV-Bang-Cr2 from India, complete
DE genome.
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KW .
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OS Croton yellow vein mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2757
RA Phaneendra C., Mandal B.;
RT ;
RL Submitted (10-OCT-2011) to the INSDC.
RL Plant Pathology, Indian Agricultural Research Institute, Pusa Campus, New
RL Delhi, Delhi 110012, India
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FH Key Location/Qualifiers
FH
FT source 1. .2757
FT /organism="Croton yellow vein mosaic virus"
FT /host="Croton bonplandianus"
FT /isolate="CYVMV-Bang-Cr2"
FT /mol_type="genomic DNA"
FT /country="India"
FT /isolation_source="plant showing yellow vein mosaic
FT symptoms"
FT /collection_date="16-Aug-2007"
FT /db_xref="taxon:207697"
FT CDS 145. .501
FT /codon_start=1
FT /product="pre-coat protein"
FT /protein_id="AEY78476.1"
FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYAPDTLGHDLIRDL
FT ISVIRARNYVEASSRYNHFHARFEGTPSSQLRQPICEPCCCPHCPRHQSKGMGEQTHVP
FT EAQDVQDVQKPRCP"
FT CDS complement(296. .613)
FT /codon_start=1
FT /product="AC5b"
FT /protein_id="AEY78482.1"
FT /translation="MGQPNTPSNIRKTNNLTHVTNIILRIKRLHLTWAFTTLRDIWASV
FT HPVHPGLPVHGSVRPCLCFGDADNGGSSTVHIWAVEVETTAYLRSGRGNDYICWTLRHN
FT F"
FT CDS 305. .1075
FT /codon_start=1
FT /product="coat protein"
FT /note="AV1"
FT /protein_id="AEY78475.1"
FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVNRAAAPIVRVTKAKAWA
FT NRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR
FT VGKRFCVKSLYFVGKIWMDENIKTKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEP
FT STATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH
FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN"
FT CDS complement(740. .1144)
FT /codon_start=1
FT /product="AC5a"
FT /protein_id="AEY78481.1"
FT /translation="MECITSRCICRPIVFNKIQSLLMLICYRIVEVTPNFQSSIHRVRG
FT MSTCHIQQQSILSVIFILPSFLVIIHHIIVNTIEFPNYSLFLSSILTTCDCCLKPPQHL
FT KTITLVVLHSSRRGLIIINIEHLLEIIWGS"
FT CDS complement(1078. .1482)
FT /codon_start=1
FT /product="replication enhancer protein"
FT /note="AC3"
FT /protein_id="AEY78479.1"
FT /translation="MDSRTGELITAAQAQNGVFIWEIRNPLYFKITQHHNRPFLMKEDI
FT ITVQIQFNHNLRKALGIHKCFLAFRIWMTSQPPTGRFLRVFKTQVLKYLNNLGVISINT
FT VIKSVDHVLWNVLHHVVYVDQSYSIKFNLY"
FT CDS complement(1223. .1627)
FT /codon_start=1
FT /product="transcription activator protein"
FT /note="AC2"
FT /protein_id="AEY78478.1"
FT /translation="MRPSSPSKAHSTQVPIKVQHKIAKKGIRRRRVDLPCGCSYFISIA
FT CHNHGFTHRGTHHCSSSTEWRVYLGDSKSPVFQDNTTPQQAIPNEGRHHHRSDTVQSQP
FT EESVGDTQMFPSLPNLDDLTASDWSFLKGI"
FT CDS complement(1530. .2615)
FT /codon_start=1
FT /product="replication associated protein"
FT /note="AC1"
FT /protein_id="AEY78477.1"
FT /translation="MPRINSFCVNAKNIFLTYPKCPIPKEQMLEILKNISCPSNRLFIR
FT VAQEKHQDGSMHIHALIQFKGKSKFRNPRHFDVTHPNSSTQFHPNFQGAKSSSDVKSYI
FT DKDGDTIDWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKEKLPKDFVLQFH
FT NLNANLDRIFTPPMEVYVSPFSSSSFDQVPEELEEWAAENIVDAAARPLRPISIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDVWYNVIDDVDPHYLKHFKEFMGAQKDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNAALKNWALKNATFITLEGPL
FT YSGSNQSAAQDSQEGDQASTS"
FT CDS complement(2120. .2458)
FT /codon_start=1
FT /product="regulatory protein"
FT /note="AC4"
FT /protein_id="AEY78480.1"
FT /translation="MGLCISMPSSNSKVNPSSETPDISMSLTLIAPPNSIQTSRELSPA
FT PTSSPTSTRTVTPSTGESFRSMDDLQEGDNRQQMTLTQQHLTQAVSQRLLESLRKNSLK
FT ILYCNFII"
XX
SQ Sequence 2757 BP; 742 A; 549 C; 655 G; 811 T; 0 other;
jn831446 Length: 2757 29-JAN-2012 Type: N Check: 9420 ..
1 accggatggc cgcgaaaaaa aatagtgggc cccatggcgc actaactgac
51 aaagacgtct ccaccaatga aaagagctcc tcagagctta attgttttgt
101 ggtcccctat ttaaacttcg ccaccaagta gtgcattgcg cactatgtgg
151 gatccattag taaacgagtt tcccgaaacc gttcacgggt ttagatgtat
201 gttagcagtt aaatatctgc agttagtaga gaagacttat gctcctgaca
251 cattggggca cgatttaatt agggatttaa tttcagtaat tagggctaga
301 aattatgtcg aagcgtccag cagatataat catttccacg cccgcttcga
351 aggtacgccg tcgtctcaac ttcgacagcc catatgtgaa ccgtgctgct
401 gcccccattg tccgcgtcac caaagcaaag gcatgggcga acagacccat
451 gtaccggaag cccaggatgt acaggatgta cagaagccca gatgtcccta
501 agggttgtga aggcccatgt aaggtgcagt cttttgatgc gaagaatgat
551 attggtcaca tgggtaaggt tatttgtctt tctgatgtta ctaggggtat
601 tgggctgacc catcgagtag ggaaacgttt ctgtgtgaag tcattgtatt
651 ttgttggcaa aatatggatg gacgagaaca tcaagaccaa gaaccatacg
701 aatactgtta tgttttggat tgtgagagat aggcgccctt caggaacccc
751 aaatgatttc cagcaagtgt tcaatgttta tgataatgag ccctctacgg
801 ctactgtgaa gaacgaccag cgtgatcgtt ttcaggtgtt gaggaggttt
851 caagcaacag tcacaggtgg tcaatatgct gctaaggaac aagctataat
901 taggaaattc tatcgtgtta acaattatgt ggtgtataat caccaggaag
951 ctgggaagta tgaaaatcac actgagaatg ctttgttgtt gtatatggca
1001 tgtactcatg cctctaaccc tgtgtatgct actttgaaag ttaggagtta
1051 cttctacgat tctgtaacaa attaacatta ataaagattg aattttattg
1101 aatacgattg gtctacatat acaacgtgat gtaatacatt ccataataca
1151 tgatcaaccg atttaattac agtgtttata ctgataactc ctaaattatt
1201 taagtattta agaacttgag tcttaaatac ccttaagaaa cgaccagtcg
1251 gaggctgtga ggtcatccag attcggaagg ctaggaaaca tttgtgtatc
1301 cccaacgctt tcctcaggtt gtgattgaac tgtatctgaa cggtgatgat
1351 gtcttccttc attaggaatg gcctgttgtg gtgttgtgtt atcttgaaat
1401 acaggggatt tcgaatctcc cagataaaca cgccattctg tgcttgagct
1451 gcagtgatga gttcccctgt gcgtgaatcc atggttgtgg caggctatgg
1501 atatgaagta tgaacaccca cacggtagat caactcgtcg acgcctgatc
1551 cccttcttgg ctatcttgtg ctgcactttg attggaacct gagtagagtg
1601 ggccttcgag ggtgatgaag gtcgcattct ttaaagccca attcttgagt
1651 gcagcatttt tctcttcatc caagaactct ttatagctgg agttgggtcc
1701 tggattgcag aggaagattg tgggaattcc ccctttaatt tgaactggct
1751 tcccgtactt ggtgttggac tgccagtcct tttgggcccc catgaactcc
1801 ttaaagtgct ttaggtagtg gggatcgacg tcatcaatga cgttatacca
1851 gacatcattg ctgtagacct ttgggctcaa atctaaatgg ccacataaat
1901 aattatgtgg gcctagagat ctagcccaca tcgtcttccc tgttcgactg
1951 tcaccctcga taacaatact tatgggcctc aaaggccgcg cagcggcatc
2001 gacgatgttc tcggcagccc attcctcaag ttcttctgga acttgatcga
2051 atgaagaaga ggaaaaagga gaaacataaa cctccattgg aggtgtaaaa
2101 atcctgtcta gatttgcatt taaattatga aattgcagta caaaatcttt
2151 agggagtttt tccttaatga ctctaagagc ctctgactta ctgcctgcgt
2201 taagtgctgc tgcgtaagcg tcatttgctg tctgttgtcc ccctcttgca
2251 gatcgtccat cgatctgaaa ctctccccag tcgatggtgt caccgtcctt
2301 gtcgatgtag gacttgacgt cggagctgga cttagctccc tggaagtttg
2351 gatggaattg ggtggagcta ttagggtgag tgacatcgaa atgtctgggg
2401 tttcggaact tggatttacc tttgaattgg atgagggcat ggatatgcat
2451 agacccatct tggtgtttct cttgggctac tctgataaat aatctattag
2501 acggacagga aatgttttta aggatttcga gcatttgttc tttgggtatt
2551 gggcatttgg gataagtaag gaagatattt ttggcattaa cacaaaaaga
2601 gttaatacga ggcatattga attggggaca ctcaaaactc tgaggaatgg
2651 gggactcggg ggactcattt atatggtgtc cctaaatggc atttctgtaa
2701 tttggtaaag taattcaaaa ttctcacgct ccaaaaagcg gccatccgta
2751 taatatt