Sequence of DPV Watermelon mosaic virus
Watermelon mosaic virus isolate RobWMV 4 polyprotein gene, partial cds.
ACC No: JN831650
Dated: 2012-12-14 | Length: 1436 | CRC: 1405632098
ID JN831650; SV 1; linear; genomic RNA; STD; VRL; 1436 BP.
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AC JN831650;
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DT 29-FEB-2012 (Rel. 111, Created)
DT 14-DEC-2012 (Rel. 115, Last updated, Version 3)
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DE Watermelon mosaic virus isolate RobWMV 4 polyprotein gene, partial cds.
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KW .
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OS Watermelon mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1436
RA Laney A.G., Avanzato M.V., Tzanetakis I.E.;
RT "High incidence of seed transmission of Papaya ringspot virus and
RT Watermelon mosaic virus, two viruses newly identified in Robinia
RT pseudoacacia";
RL Eur. J. Plant Pathol. 134(2):227-230(2012).
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RN [2]
RP 1-1436
RA Laney A.G., Avanzato M.V., Tzanetakis I.E.;
RT ;
RL Submitted (10-OCT-2011) to the INSDC.
RL Plant Pathology, University of Arkansas, 495 N Campus Dr PTSC 217,
RL Fayetteville, AR 72703, USA
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FH Key Location/Qualifiers
FH
FT source 1. .1436
FT /organism="Watermelon mosaic virus"
FT /host="Robinia pseudoacacia"
FT /isolate="RobWMV 4"
FT /mol_type="genomic RNA"
FT /country="USA"
FT /collection_date="Aug-2009"
FT /db_xref="taxon:146500"
FT CDS <1. .1184
FT /codon_start=3
FT /product="polyprotein"
FT /db_xref="GOA:H6VM86"
FT /db_xref="InterPro:IPR001205"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:H6VM86"
FT /protein_id="AFB82534.1"
FT /translation="YILRLEPEGIVSTLEWDRSKELMHRTEAICAAMIEAWGYTELLQE
FT IRKFYLWLLSKDEFKELAASGKAPYIAETALRKLYTDVNTQPSELQRYLEVLDFNHIDG
FT CCESVSLQSGKEAVENLDVGKESKKDTSDKGNKPQNSQVGQGSKEPTKIGTVSKDVNVG
FT SKGKEVPRLQKITKKMNLPTVGGKIILSLDHLLEYKPNQVDLFNTRATKTQFESWYSAV
FT KVEYDLNDEQMGVIMNGFMVWCIDNGTSPDVNGVWVMMDGEEQVEYPLKPIVENAKPTL
FT RQIMHHFSDAAEAYIEMRNSESPYMPRYGLLRNLRDRELARYAFDFYEVTSKTPNRARE
FT AIAQMKAAALAGINSRLFGLDGNISTNSENTERHTARDVNQNMHTLLGMGPPQ"
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SQ Sequence 1436 BP; 473 A; 239 C; 335 G; 389 T; 0 other;
jn831650 Length: 1436 14-DEC-2012 Type: N Check: 6250 ..
1 tatacattct gaggcttgaa cctgagggga tagtttctac cctagagtgg
51 gataggagca aggaacttat gcaccgcact gaggcaattt gtgcagctat
101 gatagaagca tggggatata ctgagctttt acaggaaatc cgcaaattct
151 atttgtggct tctgagcaaa gatgaattta aggaactcgc tgcatccgga
201 aaagctccat acatagctga gacagcattg agaaaactct acacagatgt
251 caacacacaa ccaagtgaat tgcaaagata ccttgaagtt ttggatttta
301 accatattga tggttgctgt gaatcagtgt ctttgcaatc aggaaaagaa
351 gcagttgaaa atttggatgt agggaaagag tcaaagaaag ataccagtga
401 caaagggaat aagccacaga actcgcaagt tggtcagggt agcaaagaac
451 caacaaaaat cggcacagtc agcaaggatg taaatgttgg atcgaaagga
501 aaagaagttc cacgactaca aaagataaca aagaaaatga atcttccaac
551 agttggtggg aaaatcattc ttagcttaga ccatttgctt gagtacaaac
601 ctaatcaagt tgatctgttt aacactcgag caacaaaaac acagtttgaa
651 tcatggtaca gcgcagtcaa agttgagtat gatcttaatg acgagcaaat
701 gggtgtgatt atgaatggtt ttatggtttg gtgtatcgat aacggtacat
751 ctccagatgt caatggagtg tgggtaatga tggatgggga agagcaagtt
801 gagtacccac taaagccaat tgttgaaaat gcaaagccaa ctttgagaca
851 aatcatgcac catttctcag atgcagcgga agcatatatt gaaatgagaa
901 actctgaaag tccgtatatg cctagatacg gattactaag aaatttgaga
951 gacagggaat tagcacgcta tgcttttgat ttctatgagg ttacttctaa
1001 aacgccaaat agggcaagag aagcaatagc acaaatgaag gccgcagctc
1051 tcgcgggaat taacagcagg ttatttggac ttgatggtaa tatctcgacc
1101 aattccgaaa atactgaaag gcacactgca agggacgtaa atcagaatat
1151 gcatactttg ttgggtatgg gtccaccgca gtaaagacta ggtaaactgg
1201 tcacagttag catttcgggt cgttataagt tttctataat ataatatgtc
1251 gcactttatt ttagtatagt gtgatttcat cacctttgta ctgtttatgt
1301 tagcgtggtt taaccacctt tgtgtgcttt atattatagt ttatgcgtag
1351 cagggagaac cattacaatg ccggagttgt ttgtagtgtg atttcatcac
1401 gattaataac cgaggtacgg taatgtttgt tgtcct