Sequence of DPV Dalechampia chlorotic mosaic virus
Dalechampia chlorotic mosaic virus isolate Venezuela:Albarico 1020:2007 segment DNA-B, complete sequence.
ACC No: JN848776
Dated: 2013-01-29 | Length: 2598 | CRC: -2132737238
ID JN848776; SV 1; circular; genomic DNA; STD; VRL; 2598 BP.
XX
AC JN848776;
XX
DT 03-OCT-2012 (Rel. 114, Created)
DT 29-JAN-2013 (Rel. 115, Last updated, Version 2)
XX
DE Dalechampia chlorotic mosaic virus isolate Venezuela:Albarico 1020:2007
DE segment DNA-B, complete sequence.
XX
KW .
XX
OS Dalechampia chlorotic mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2598
RX PUBMED; 22926716.
RA Fiallo-Olive E., Chirinos D.T., Geraud-Pouey F., Moriones E.,
RA Navas-Castillo J.;
RT "Complete genome sequences of two begomoviruses infecting weeds in
RT Venezuela";
RL Arch. Virol. 158(1):277-280(2013).
XX
RN [2]
RP 1-2598
RA Fiallo-Olive E., Chirinos D., Geraud-Pouey F., Navas-Castillo J.,
RA Moriones E.;
RT ;
RL Submitted (12-OCT-2011) to the INSDC.
RL Fruticultura Subtropical y Fitopatologia, Instituto de Hortofruticultura
RL Subtropical y Mediterranea 'La Mayora', Estacion Experimental La Mayora,
RL Algarrobo-Costa, Malaga 29750, Spain
XX
FH Key Location/Qualifiers
FH
FT source 1. .2598
FT /organism="Dalechampia chlorotic mosaic virus"
FT /segment="DNA-B"
FT /host="Dalechampia sp."
FT /isolate="Venezuela:Albarico 1020:2007"
FT /mol_type="genomic DNA"
FT /country="Venezuela"
FT /collection_date="Nov-2007"
FT /db_xref="taxon:1227356"
FT gene 447. .1217
FT /gene="BV1"
FT CDS 447. .1217
FT /codon_start=1
FT /gene="BV1"
FT /product="nuclear shuttle protein"
FT /db_xref="UniProtKB/TrEMBL:J9QIU5"
FT /protein_id="AFQ93619.1"
FT /translation="MYPSRYRRGWSSTQRRGYSRQSLMKRSYDVKRMDGRRQHSNSNKG
FT RDESKLSLQRIHEDQFGPGFVMSHNTALSTFITFPSLGRNGSSRTRSYIKLRRLRYKGT
FT LKIEREHGDVNMDAPTPKIEGVFSMVIVVDRKPHLNPSGTLHSFDELFGARIHSHGNLA
FT ISTALKDRFYIRHVLKRVISVDKDSLMVDLEGTTTLSNRRFTCWSSFKDLERDACTGVY
FT ANISKNALLVYYCWMSDAMSKASTFVSFDLDYIG"
FT gene complement(1308. .2189)
FT /gene="BC1"
FT CDS complement(1308. .2189)
FT /codon_start=1
FT /gene="BC1"
FT /product="movement protein"
FT /db_xref="UniProtKB/TrEMBL:J9QSI1"
FT /protein_id="AFQ93620.1"
FT /translation="MESQLAVAPNAFNYIESHRDEYQLSHDLTEIVLQFPSTAAQLTAR
FT LSRSCMKIDHCVIEYRQQVPINAAGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF
FT SSSFFSLKDPIPWKLYYRVSDSNVHQATHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS
FT KQFTDKDVDFAHVGYGKWERRMIRSTSCSKHGYNGPIEIGPGESWASRSAIGQAHSTVD
FT TDITDASRPYRELNRLSTPILDPGESASVVGLQRTQSNITMSMSQLNEIVRTAVQECIN
FT TNCSPSIPKSLR"
XX
SQ Sequence 2598 BP; 692 A; 509 C; 600 G; 797 T; 0 other;
jn848776 Length: 2598 29-JAN-2013 Type: N Check: 9900 ..
1 accggatggc cgcgctgttt ttggtttctc ggcccaggcc caggcgcgcg
51 tgtttctctt gggcccggcc ctggtccaag cgctgctata ttgctgccca
101 atcatatgat gtctgaggag gctgtgtatt aagaacttcg cagcaaaggc
151 gtggtggtcc cttttctttg gtgactgtgc actgtcattt tcagtgtctg
201 actttaattt aaatatcttg gcgctctttt gtaatcagct gttatacacg
251 tgtcagccta actttgggca aatggcgaaa atgacaggac atattttcag
301 tgcgttttac ttcgaggagc attaaccaat tgcatttgga ggagaatgtt
351 taactaattc atttaagcac cgtcagttaa tatttaagaa cgcactgatg
401 gaaatggata tcatgttagc aacagtttag gaagtgcatt ttaaacatgt
451 atccatctag atatagacgt ggttggtcgt ctacccaacg acgtggttat
501 tctcgacagt cattgatgaa acgttcatat gatgtgaaac gtatggatgg
551 gagacgacag catagtaatt caaacaaggg ccgtgatgag tcaaagcttt
601 cacttcaacg gattcatgaa gaccagtttg ggccaggatt tgtaatgagc
651 cataacacgg ccctgtccac attcatcacg ttccccagtc taggaagaaa
701 tggatccagc cgaacaaggt cctatattaa attaaggcgt ttacgttaca
751 aggggactct gaagatcgag cgtgagcatg gcgatgtcaa catggatgct
801 cccactccta agattgaagg tgtattttct atggttatcg tggttgatcg
851 taaaccacat ttgaatccat ctgggactct gcactcattt gatgagttat
901 ttggagcaag gattcatagc catggtaatt tagcaatcag tactgcattg
951 aaggatcgtt tctatataag gcatgtcttg aaacgtgtca tatcagttga
1001 caaggactcc ttaatggttg accttgaggg cacgacgacc ttgtccaaca
1051 ggcgttttac ttgttggtct tcttttaaag atttagaacg tgatgcatgt
1101 actggtgttt atgcaaatat aagcaagaac gccttactag tctactactg
1151 ctggatgtcg gatgctatgt ctaaggcatc aacatttgta tcgtttgacc
1201 ttgattatat tggataagtt agctagattt gtataacttc aatgacacat
1251 ctgtaataac tatcaatgat taaactcaaa atagaaataa aatatcccat
1301 attttattta tctcaatgat ttcggtatcg aaggagaaca gtttgtgtta
1351 atacactcct gtaccgctgt cctcacaatc tcgtttaact gggacatgga
1401 catggttatg ttggattgtg ttctctggag tccaacgact gaggcagact
1451 ctcctgggtc taatattggc gtcgataatc tgtttagctc tctgtatgga
1501 cgggaagcgt ctgtaatatc cgtatccaca gtcgaatggg cttgtcctat
1551 tgcactcctt gaggcccatg actctcctgg ccctatttct attgggccgt
1601 tgtagccatg tttcgaacag gatgtggatc ggatcattct tctctcccat
1651 tttccatagc ccacgtgagc aaaatcgaca tccttgtctg taaactgttt
1701 ggacaggatc ttcactgttg gtgctcggaa tgggatatcc actgaatgtt
1751 tagctgtaga cagtttcagc ttacccttga attttgcgaa gtgggttgct
1801 tggtgaacat ttgaatcgct aaccctgtaa tatagcttcc atggaattgg
1851 gtctttgaga gagaagaatg aggaagagaa atagtggaga tctatgttac
1901 acctgattgg gaaagtccac gacgcctgta aggattcatt gtccgtcatc
1951 cttttgtcgt gaatctccac tattacagtt ccagcagcgt taatgggtac
2001 ttgctgtctg tattctatca cgcaatggtc gattttcata caactacgac
2051 tgagcctagc agttaattga gctgctgtag aaggaaactg caagacgatc
2101 tcagttaggt catgagacag ctgatactca tctctatgcg attctatata
2151 gttaaatgcg ttcggcgcaa ctgccaactg agactccatt tatggaaata
2201 ctgtccgcgc agcggcactg tttccggtga taaactggag agactgttta
2251 tcgagggaga taaccttctt ctggaagttt agagctgagt ctgatttatg
2301 agggggagag atgtgatatc ttataaattt caggagaata ggagagatta
2351 gtacaaaaat aattatttag cactgggaag tatcaacatc actgatgaca
2401 ggcttattta tagaggaagg caggttaaac gacgtcgaat ggcaaaatag
2451 caattttagt ccctcacacc agtgcacatt taccaaacca actggtgtat
2501 ggaaaactgg ctgatatgaa ctggtgtatg gtgtgctact tatagaagtc
2551 ctctctattt catttgtagg ggcattttcg gccatccgct ataatatt