Sequence of DPV Zucchini yellow mosaic virus

Zucchini yellow mosaic virus isolate MT92-7 coat protein gene, partial cds.

ACC No: JN861007

Dated: 2012-02-29 | Length: 843 | CRC: -1739534016

                
ID   JN861007; SV 1; linear; genomic RNA; STD; VRL; 843 BP.
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AC   JN861007;
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DT   29-FEB-2012 (Rel. 111, Created)
DT   29-FEB-2012 (Rel. 111, Last updated, Version 1)
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DE   Zucchini yellow mosaic virus isolate MT92-7 coat protein gene, partial cds.
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KW   .
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OS   Zucchini yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-843
RA   Desbiez C., Chandeysson C., Lecoq H.;
RT   "Molecular diversity of zucchini yellow mosaic virus";
RL   Unpublished.
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RN   [2]
RP   1-843
RA   Desbiez C., Chandeysson C., Lecoq H.;
RT   ;
RL   Submitted (17-OCT-2011) to the INSDC.
RL   Plant Pathology, INRA, Domaine Saint Maurice, Montfavet 84140, France
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .843
FT                   /organism="Zucchini yellow mosaic virus"
FT                   /isolate="MT92-7"
FT                   /mol_type="genomic RNA"
FT                   /country="Martinique"
FT                   /collection_date="1992"
FT                   /db_xref="taxon:12232"
FT   CDS             <1. .843
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT                   /protein_id="AFB82649.1"
FT                   /translation="QSDTQPTVADAGATKKDKEDDKGKNKDVTGSGSGEKTVVAAKKDK
FT                   DVNAGSHGKIVPRLSKITKKMSLPRVKGNVILDIDHLLEYKPDQIELYNTRASHQQFAS
FT                   WFNQVKTEYDLNDQQMGVVMNGFMVWCIENGTSPDINGVWFMMDGNEQVEYPLKPIVEN
FT                   AKPTLRQIMHHFSDAAEAYIEMRNAEAPYMPRYGLLRNLRDRSLARYAFDFYEVNSKTP
FT                   ERAREAVAQMKAAALSNVSSRLFGLDGNVATTSEDTERHTARDVNRNMHTLLGVNTMQ"
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SQ   Sequence 843 BP; 276 A; 160 C; 208 G; 199 T; 0 other;

jn861007 Length: 843  29-FEB-2012  Type: N  Check: 4744  ..

       1  caatcagaca ctcaaccaac tgtggcagac gctggagcta caaagaaaga
      51  taaagaagat gacaaaggga aaaacaagga tgtcacaggc tccggctcag
     101  gtgagaaaac agtagtagct gccaagaaag acaaggatgt gaatgctggt
     151  tcccatggga aaattgtgcc gcgtctttcg aagatcacaa agaaaatgtc
     201  actgccacgc gtgaaaggga atgtgatact cgatatcgat catttgctgg
     251  aatataagcc ggatcaaatt gagttatata acacacgagc gtctcatcag
     301  caatttgcct cttggttcaa ccaagttaag acagaatatg atctgaatga
     351  tcaacagatg ggagttgtga tgaatggttt catggtttgg tgtattgaaa
     401  atggcacctc acctgacatt aatggagtgt ggtttatgat ggacggaaat
     451  gaacaagttg agtatccttt gaaaccgata gttgaaaatg caaagccaac
     501  gctgcggcaa ataatgcacc atttttcaga tgcagcggag gcatatatag
     551  agatgagaaa tgcagaggca ccatacatgc cgaggtatgg tttgcttcga
     601  aacctacggg ataggagttt agcacgatac gctttcgatt tctatgaagt
     651  caattctaaa actcctgaaa gagcccgtga agctgttgcg cagatgaaag
     701  cagcagctct tagcaatgtt tcttcaaggt tgtttggcct tgatggaaat
     751  gtcgccacca ctagcgaaga cactgaacgg cacactgcac gtgatgttaa
     801  cagaaacatg cacaccttac taggtgtgaa tacaatgcag taa