Sequence of DPV Southern rice black-streaked dwarf virus

Southern rice black-streaked dwarf virus isolate Hunan yy segment 10, complete sequence.

ACC No: JQ337963

Dated: 2012-04-17 | Length: 1797 | CRC: -2071136384

                
ID   JQ337963; SV 1; linear; genomic RNA; STD; VRL; 1797 BP.
XX
AC   JQ337963;
XX
DT   17-APR-2012 (Rel. 112, Created)
DT   17-APR-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Southern rice black-streaked dwarf virus isolate Hunan yy segment 10,
DE   complete sequence.
XX
KW   .
XX
OS   Southern rice black-streaked dwarf virus
OC   Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Fijivirus;
OC   unclassified Fijivirus.
XX
RN   [1]
RP   1-1797
RA   Cui Y.;
RT   "Sequencing and bioinformatics analysis of the genome segment S10 of
RT   Southern rice black-streaked dwarf virus";
RL   Unpublished.
XX
RN   [2]
RP   1-1797
RA   Cui Y.;
RT   ;
RL   Submitted (29-DEC-2011) to the INSDC.
RL   Plant Pathology, Hunan Agricultural University, Nongdalu, Changsha, Hunan
RL   410128, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1797
FT                   /organism="Southern rice black-streaked dwarf virus"
FT                   /segment="10"
FT                   /host="rice"
FT                   /isolate="Hunan yy"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:519497"
FT   CDS             22. .1695
FT                   /codon_start=1
FT                   /product="p10"
FT                   /protein_id="AFH66951.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNSLFHE
FT                   SNIVKSPHIASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKEHIQSYFRNEHQ
FT                   PIFQTLTNNNLSDEFLGVTTFGLSLFATSKLDAEQIERVQIETLTEGNVTLKPFSADGL
FT                   EVILDDSYIGIIGKISGLEVHKLLDKCCREVPAQMGILTDEVKLLIRSGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQYSRQMFEKLNLFFNISLSIIPVSALKTIHVFEKELSALDADK
FT                   SLLEQTWSGVSSFIETWKVKTKAKDEDQDEYELTGLSALRKGVDGNSVSSPYNDKKFIE
FT                   WYSKTFAKIEKGSSLRKTEIEDKNTSGTSNITKQVKIHFPVQYFDEVKSNGHEKSVTVI
FT                   TNKGEMSLESYRKIGEILSAIWKRGKALAAPCIDYIKLGVEKAYHLAPVIMKKYNLTID
FT                   DIIHFIEIGPSYLAKLDKIDDWSLIAKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLLKADRDRLIKKATTANSSTSNSNSEHGQKIVLNKVTR"
XX
SQ   Sequence 1797 BP; 616 A; 323 C; 317 G; 541 T; 0 other;

jq337963 Length: 1797  17-APR-2012  Type: N  Check: 5648  ..

       1  aagttttttt cctcatccat aatggctgac ataagacttg acatagcgcc
      51  cgatcttatc cataatggtg tgcctcaaag actttcagat acgataattc
     101  taaacaaccg accaacaatc acacttctgt ctcacttcaa ctctcttttt
     151  cacgaatcaa atattgttaa atcaccccac atcgcgtcat ctcaaactac
     201  agttaattta tacattcgta agcatttact gactcgactt catgatagat
     251  tacaaactgt cgaaaccagt actctaccga acattactca acttaaagaa
     301  catattcaaa gttatttccg taatgaacat caacctattt ttcaaaccct
     351  gactaacaat aatcttagtg atgaattttt aggtgtaact acttttggtt
     401  taagtttatt cgcaacttcg aagttggatg cagaacaaat agaacgagta
     451  caaattgaga ccctaactga aggaaacgtt acacttaaac cattctccgc
     501  tgacggttta gaagtaattt tagatgatag ttacatcgga ataattggaa
     551  aaatttctgg tttagaagta cataaattgc tcgataaatg ttgtcgtgaa
     601  gttcctgctc aaatgggaat attaactgac gaagttaaac ttttaatacg
     651  ttccggaaaa ttaagaattg acggtggata cgatttcaat tgtcctgcta
     701  gtacaacaga cgtgacacac tatggcggtt acgaccaata ttcgagacaa
     751  atgtttgaaa aattgaattt gttctttaac atcagtttga gcattattcc
     801  tgtttctgca cttaaaacta ttcatgtatt tgagaaagaa ctaagcgctt
     851  tagatgctga caaatcactt ttagaacaaa catggagcgg agtctcctca
     901  tttattgaaa cctggaaagt aaaaactaaa gctaaagatg aagatcaaga
     951  tgagtacgaa ctaactggac tgtctgcact tagaaaagga gtcgatggca
    1001  attctgtatc tagcccttac aatgataaga aattcatcga atggtattct
    1051  aagacgtttg ctaaaataga gaaaggttca tcgttgcgta agaccgaaat
    1101  tgaagacaaa aatacatccg gcacttcaaa cataacaaag caagttaaaa
    1151  ttcattttcc tgttcagtat ttcgatgaag tcaaatctaa cggtcatgaa
    1201  aaaagtgtta ccgtaatcac taataaaggt gaaatgtcat tggaatctta
    1251  ccgaaagata ggtgaaatat taagtgcgat ctggaaacgt ggtaaggcat
    1301  tagctgctcc ctgcatcgat tacatcaaac ttggcgtcga aaaagcttat
    1351  catttagctc ctgtaatcat gaagaaatat aatttaacta ttgatgatat
    1401  aattcatttt attgaaattg gtccttcata cttagcgaaa ttggataaaa
    1451  ttgatgattg gtccttaatt gcaaaattga ttattaccag tgttttgcca
    1501  aacatcattc aagcggtgta taaaacagat cctagcaata atgttatgaa
    1551  ttcagttatt attagcagag ccaacaattt attgaaggcg gatcgcgatc
    1601  gtctaattaa gaaagctacc actgcaaatt catctaccag taattcaaat
    1651  tcagaacatg gtcaaaagat tgtgttaaat aaagtcacca gatgataatt
    1701  gaggtttcat cattagcgcg actagttcag tgctgtgtgg tcttcagttc
    1751  attatcgacg ccgagtgacg acggctaggg ggaaagcagc tgatgtc