Sequence of DPV Unnamed Chinese phlebovirus

Phlebovirus WCH/97/HN/China/2011 nonstructural protein and nucleocapsid protein genes, complete cds.

ACC No: JQ341190

Dated: 2012-04-22 | Length: 1745 | CRC: 22672961

                
ID   JQ341190; SV 1; linear; genomic RNA; STD; VRL; 1745 BP.
XX
AC   JQ341190;
XX
DT   22-APR-2012 (Rel. 112, Created)
DT   22-APR-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Phlebovirus WCH/97/HN/China/2011 nonstructural protein and nucleocapsid
DE   protein genes, complete cds.
XX
KW   .
XX
OS   Phlebovirus WCH/97/HN/China/2011
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus;
OC   unclassified Phlebovirus.
XX
RN   [1]
RP   1-1745
RA   Liu W., Zhuang L.;
RT   "Novel Bunyavirus Infection in China: Preliminary Clinical Characteristics
RT   and Treatment Effects";
RL   Unpublished.
XX
RN   [2]
RP   1-1745
RA   Liu W., Zhuang L.;
RT   ;
RL   Submitted (30-DEC-2011) to the INSDC.
RL   Laboratory of Epidemiology, Beijing Institute of Microbiology and
RL   Epidemiology, 20 Dong-Da Street, Fengtai District, Beijing 100071, P.R.
RL   China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1745
FT                   /organism="Phlebovirus WCH/97/HN/China/2011"
FT                   /segment="S"
FT                   /host="Homo sapiens"
FT                   /lab_host="Vero E6"
FT                   /isolate="WCH/97/HN/China/2011"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /isolation_source="serum"
FT                   /collection_date="Jul-2011"
FT                   /db_xref="taxon:1173018"
FT   CDS             29. .910
FT                   /codon_start=1
FT                   /product="nonstructural protein"
FT                   /protein_id="AFH88228.1"
FT                   /translation="MSLSKCSNVDLKSVAMNANTVRLEPSLGEYPTLRRDLVECSCSVL
FT                   TLSMVKRMGKMTNTVWLFGNPKNPLHQLEPGLEQLLDMYYKDMRCYSQRELSALRWPSG
FT                   KPSVWFLQAAHMFFSIKNSWAMETGRENWRGLFHRITKSQKYLFEGDMILDSLEAIEKR
FT                   RLRLGLPEILITGLSPILDVALLQIESLARLRGMSLNHHLFTSSSLRKPLLDCWDFFIP
FT                   IRKKKTDGSYSVLDEDDEPGVLQGYPYLMAHYLNRCPFHNLIRFDEELRTAALDTIWGR
FT                   DWPAIGDLPKEV"
FT   CDS             complement(965. .1702)
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AFH88229.1"
FT                   /translation="MSEWSRIAVEFGEQQLNLTELEDFARELAYEGLDPALIIKKLKET
FT                   GGDDWVKDTKFIIVFALTRGNKIVKASGKMSNSGSKRLMALQEKYGLVERAETRLSITP
FT                   VRVAQSLPTWTCAAAAALKEYLPVGPAVMNLKVENYPPEMMCMAFGSLIPTAGVSEATT
FT                   KTLMEAYSLWQDAFTKTINVKMRGASKTEVYNSFRDPLHAAVNSVFFPNDVRVKWLKAK
FT                   GILGPDGVPSRAAEVAAAAYRNL"
XX
SQ   Sequence 1745 BP; 438 A; 438 C; 409 G; 460 T; 0 other;

jq341190 Length: 1745  22-APR-2012  Type: N  Check: 3851  ..

       1  acacaaagac ccccttcatt tagaaaccat gtcgctgagc aaatgctcca
      51  acgttgacct caaatctgta gcaatgaatg ctaacactgt taggcttgag
     101  ccttccctgg gagagtaccc cactcttagg agagacctcg ttgaatgctc
     151  ttgtagtgtg ttgactttgt cgatggtcaa gaggatgggc aagatgacca
     201  acacagtatg gttgtttggc aaccctaaaa atcctcttca tcagcttgag
     251  cctggacttg aacagctgtt agacatgtac tacaaggaca tgaggtgcta
     301  ctcccagaga gaactgagtg ctcttaggtg gcctagtggg aagccatctg
     351  tatggttcct acaggcagct catatgttct tctccatcaa gaacagctgg
     401  gcaatggaaa ccggaagaga gaactggcgg ggcctcttcc acaggataac
     451  aaaaagccaa aagtatcttt ttgaagggga catgatattg gattctcttg
     501  aagccataga gaagcgaaga cttagacttg ggttgcctga gattctgata
     551  actggactat ccccaattct ggatgtggcc ctcctccaga tagagtcact
     601  tgcaaggcta agaggcatga gcttgaacca ccacttgttc acttcttcct
     651  cattgcgtaa gcctctgtta gactgttggg atttcttcat tcctatccgc
     701  aaaaagaaga cagatggctc atacagtgtc ttggatgagg atgatgagcc
     751  tggggtcctc cagggttacc catatctgat ggcacactat ttaaataggt
     801  gcccattcca caacctcatc aggtttgatg aagaactgag aactgcagcc
     851  ctggacacca tttggggaag agattggcca gccattggtg acctcccgaa
     901  ggaggtctaa ttttgtcgaa ttggatcatg gaatttagcc taattggata
     951  tgtcaaattg ctgcttacag gtttctgtaa gcagcagcag caacctcagc
    1001  agctctgctg ggaaccccat ctgggccaag gattcccttg gccttcagcc
    1051  acttcacccg aacatcattg ggaaagaaga cagagttcac agcagcatgg
    1101  agagggtccc tgaaggagtt ataaacttct gtcttgctgg ctccacgcat
    1151  cttcacattg atagtcttgg tgaaggcatc ttgccacaga gagtaagcct
    1201  ccataagggt cttggttgtg gcttcagata cccccgcagt tggaattagg
    1251  gatccaaagg ccatgcacat catctcaggg ggataattct caaccttcag
    1301  gttcatgacg gctggcccca ctgggagata ctcctttaag gctgctgctg
    1351  ctgcacatgt ccaggtggga agactctgcg ctaccctcac aggagtgatt
    1401  gagagcctgg tttctgccct ctcaaccagt ccatacttct cttggagtgc
    1451  catcaacctc ttagaccctg agttagacat tttccctgat gccttgacga
    1501  tcttattgcc tcgagtcagg gcaaagacaa tgatgaactt cgtatccttc
    1551  acccaatcat ctccacctgt ctccttcagc ttcttgatga tcaaagcagg
    1601  atcaaggcct tcataggcca gctctctcgc gaaatcctca agctcagtca
    1651  aattgagctg ctgctcacca aactccactg caatcctgga ccactctgac
    1701  atgatcactc ctttgcgtct ttcctttttt gggggttctt tgtgt