Sequence of DPV Lily mottle virus

Lily mottle virus isolate LMoV-YA coat protein gene, partial cds.

ACC No: JQ361097

Dated: 2012-04-25 | Length: 822 | CRC: 984801126

                
ID   JQ361097; SV 1; linear; genomic RNA; STD; VRL; 822 BP.
XX
AC   JQ361097;
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DT   25-APR-2012 (Rel. 112, Created)
DT   25-APR-2012 (Rel. 112, Last updated, Version 1)
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DE   Lily mottle virus isolate LMoV-YA coat protein gene, partial cds.
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KW   .
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OS   Lily mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-822
RA   Wang L., Kong B., Zhao D., Chen H.;
RT   "Detection of Lily mottle virus in Native breed by RT-PCR";
RL   Unpublished.
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RN   [2]
RP   1-822
RA   Wang L., Kong B., Zhao D., Chen H.;
RT   ;
RL   Submitted (04-JAN-2012) to the INSDC.
RL   Department of Phytopathology, Yunnan Agricultural University, National
RL   Center for Agricultural Biodiversity, Kunming, Yunnan Province 650201,
RL   China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .822
FT                   /organism="Lily mottle virus"
FT                   /host="Lilium davidii (lily)"
FT                   /isolate="LMoV-YA"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Yaoan, Yunnan"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:32624"
FT   CDS             <1. .>822
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /protein_id="AFI26385.1"
FT                   /translation="ANETLNAGASSSTQASRSTRPEAAIDVAPQQSSEAGVRDRDVDAG
FT                   TVGTYQIPRLKALATKINVPKVKGRMIVNTGHLVNYNPDQTDISNTRSTQKQFEAWYNS
FT                   VKDEYGLNDESMALAMNGLMVWCIENGTSPNVNGVWLMMDGDQQVEFPLRPILEHAKPT
FT                   LRQIMAHFSNLAEAYIEKQNLEKPYMPRYGLQRNLTDFNLARFAFDFYEVTSRTPARAK
FT                   EAHFQMKTAALRGKQSRLFGLDGKVNTQDEDTERHTADDVNKNMHSLLGISM"
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SQ   Sequence 822 BP; 254 A; 193 C; 198 G; 177 T; 0 other;

jq361097 Length: 822  25-APR-2012  Type: N  Check: 5257  ..

       1  gcaaatgaga cactcaatgc tggagcttcc agttccacac aagcgagccg
      51  atcgactcga cctgaggctg caattgatgt ggcaccgcaa cagagttctg
     101  aggctggagt gcgtgatcgt gatgtcgacg ccggcaccgt gggaacatac
     151  caaatcccgc gactgaaggc actagcaaca aagatcaacg tacccaaggt
     201  caaggggcga atgatagtga acactgggca ccttgtgaat tacaacccag
     251  accaaacaga tatttcaaat acaaggtcaa cccagaagca gtttgaggct
     301  tggtacaact cagtgaaaga cgagtatggt ctcaacgacg agagtatggc
     351  tctcgcaatg aatggtctga tggtttggtg catagagaat ggcacctcac
     401  caaatgtaaa tggcgtgtgg ctcatgatgg acggagatca gcaagttgaa
     451  tttcctttac gtcctatact tgaacacgca aaaccgacgc tgcgccaaat
     501  tatggcgcat ttctcaaacc tcgctgaagc ttatattgag aagcaaaatt
     551  tagagaaacc gtacatgcct aggtacggcc ttcagcgaaa tctcaccgac
     601  ttcaatctag cacgatttgc ttttgatttc tatgaagtta cttcacgcac
     651  gccagcacgc gctaaagaag cacacttcca aatgaaaaca gccgctttac
     701  gcggaaaaca atcgaggcta tttgggctag atggaaaggt gaacacccaa
     751  gatgaggaca cggagaggca tacagcagat gatgtcaata aaaacatgca
     801  ctccttactt ggaatttcta tg