Sequence of DPV Lily mottle virus
Lily mottle virus isolate LMoV-HB HC protein gene, partial cds.
ACC No: JQ361107
Dated: 2012-04-25 | Length: 1374 | CRC: -1379739947
ID JQ361107; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
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AC JQ361107;
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DT 25-APR-2012 (Rel. 112, Created)
DT 25-APR-2012 (Rel. 112, Last updated, Version 1)
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DE Lily mottle virus isolate LMoV-HB HC protein gene, partial cds.
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KW .
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OS Lily mottle virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1374
RA Wang L., Kong B., Chen H.;
RT "Detection of Lily mottle virus in Lily by RT-PCR";
RL Unpublished.
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RN [2]
RP 1-1374
RA Wang L., Kong B., Chen H.;
RT ;
RL Submitted (05-JAN-2012) to the INSDC.
RL Department of Phytopathology, Yunnan Agricultural University, National
RL Center for Agricultural Biodiversity, Kunming, Yunnan Province 650201,
RL China
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FH Key Location/Qualifiers
FH
FT source 1. .1374
FT /organism="Lily mottle virus"
FT /host="Lilium lancifolium Thumb. (lily)"
FT /isolate="LMoV-HB"
FT /mol_type="genomic RNA"
FT /country="China:Hubei"
FT /collection_date="2008"
FT /db_xref="taxon:32624"
FT CDS <1. .>1374
FT /codon_start=1
FT /product="HC protein"
FT /note="HC-Pro"
FT /protein_id="AFI26395.1"
FT /translation="SRPGDKFWAGFNSQFLRIKPKGIPHTCTSNFNVFECGQVAALMCQ
FT ALYPCGRITCQQCASEYLEPTKVELGEKLSDGLYRTSSQIRENHQEFAHVAHILTVIAD
FT LLSLKNNNMEAFTEVHKLIGEQTQSPFTHLNRLNSILIKGSDMSSNELYECSDCIRELA
FT RFQKNRTDNIKKLDISVFRNKASSKSYFNLDLMCDNQLDKNGNFEWGQRGYHAKRFLSN
FT YFEVVNTQNAYREHTLRKHPNGTRELAIGKFIVSTNFEVFRKSMEGKRIPQMPVTEACL
FT SQRGERFIYQCCCVTNEDGTPLESTFRMPTKNTLVLGNTGDEKFVDMPTDTDEKMYIAR
FT EGYCYINIFFAMLINVRESQAKAFTKMVRDRLVPELGTWPTMIDVATACHTLTVFFPDT
FT LSAELPRILVDHNTKTMHVIDSYGSVSTGYHQLKANTVSQLVLFASDTLKSEMKHYQVG
FT "
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SQ Sequence 1374 BP; 415 A; 334 C; 327 G; 298 T; 0 other;
jq361107 Length: 1374 25-APR-2012 Type: N Check: 2413 ..
1 tcgcgcccag gcgataaatt ctgggcagga ttcaactccc aattcctcag
51 gatcaaaccc aagggaatac cacacacttg cacatcaaac ttcaatgtct
101 tcgaatgtgg gcaggtcgcg gctcttatgt gccaagcact gtacccatgt
151 gggagaatta catgtcagca gtgtgcgtcc gagtacctgg agccgacgaa
201 ggttgaactc ggggaaaagc tcagcgatgg tttgtataga acaagttcgc
251 aaattcgtga aaaccaccaa gagttcgccc atgtggcaca catactcact
301 gtgatagctg atcttctgag cctcaagaac aacaacatgg aggcgttcac
351 agaagtccac aaactcatag gtgagcaaac acagtcacca ttcacacacc
401 tcaatcgctt gaactcaata ctgatcaaag gcagcgatat gagcagcaat
451 gagctgtatg aatgttcaga ctgcattcga gagctagcgc gattccagaa
501 gaacagaaca gataacatca agaaactgga cattagcgtg tttcggaata
551 aagcatcctc caagtcatac ttcaacctgg acttaatgtg tgacaaccaa
601 ctcgataaga atggaaattt cgaatggggc cagcgaggct atcatgccaa
651 acggttctta tcgaattatt ttgaggttgt caacacacag aatgcctacc
701 gagagcacac actgaggaag catccgaatg gcacgcgaga gctcgcaatc
751 gggaaattta tagtgtcaac aaactttgaa gtgtttcgca agagcatgga
801 agggaagcgc ataccacaaa tgcctgttac tgaggcttgc ctgagtcagc
851 gtggagagcg tttcatttac cagtgctgct gtgtaacaaa cgaagatggc
901 actccactcg agtcgacatt caggatgcca acgaagaaca cactcgtgct
951 tgggaacacg ggtgacgaga aatttgtcga catgcccacc gacacggatg
1001 agaagatgta tatagctcga gagggctact gctacatcaa catatttttc
1051 gccatgttaa taaacgttcg tgaaagtcaa gcaaaggcat ttacgaagat
1101 ggtgcgagac cgcctcgtac ccgagcttgg aacatggcca accatgatcg
1151 atgtggcaac agcatgccac acattgactg tcttcttccc agacacactg
1201 agcgcagaac tcccgcgaat tctcgtggac cacaacacta agacgatgca
1251 tgtgattgac tcgtacggat ctgttagcac tggctaccac cagttaaagg
1301 ctaacacagt gagtcagcta gttctctttg ctagtgacac gctgaagtca
1351 gaaatgaagc actaccaggt cggc