Sequence of DPV Lily mottle virus

Lily mottle virus isolate LMoV-NJ P1 protein gene, partial cds.

ACC No: JQ361117

Dated: 2012-04-25 | Length: 927 | CRC: -1570730840

                
ID   JQ361117; SV 1; linear; genomic RNA; STD; VRL; 927 BP.
XX
AC   JQ361117;
XX
DT   25-APR-2012 (Rel. 112, Created)
DT   25-APR-2012 (Rel. 112, Last updated, Version 1)
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DE   Lily mottle virus isolate LMoV-NJ P1 protein gene, partial cds.
XX
KW   .
XX
OS   Lily mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-927
RA   Wang L., Kong B., Chen H.;
RT   "Detection of Lily mottle virus in Lily by RT-PCR";
RL   Unpublished.
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RN   [2]
RP   1-927
RA   Wang L., Kong B., Chen H.;
RT   ;
RL   Submitted (05-JAN-2012) to the INSDC.
RL   Department of Phytopathology, Yunnan Agricultural University, National
RL   Center for Agricultural Biodiversity, Kunming, Yunnan Province 650201,
RL   China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .927
FT                   /organism="Lily mottle virus"
FT                   /host="Lilium davidii (lily)"
FT                   /isolate="LMoV-NJ"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Nanjian, Yunnan"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:32624"
FT   CDS             <1. .>927
FT                   /codon_start=1
FT                   /product="P1 protein"
FT                   /note="P1"
FT                   /protein_id="AFI26405.1"
FT                   /translation="ASFMVGSILVDTASVLKESFAQKVLTTPPVLVAQPVQRGFGAARM
FT                   CARKAIADDEKKVAKAFLALEARCAARVSGMGTIRVKVTRSGTLRAKPLPKKEQARLRK
FT                   AERKARLDHEEFLKGSPTVIGHISIAGGAQPSQDMVEPMSTRKAPWHSVSKRARKAIPR
FT                   SPTLNETGLASLMQAIAKIGAKNSMKIEIVDKRRVQARYIKRDAGSYLQVRVAHHEGLR
FT                   RRRDLKLSAFADQCLTQLVRTTHGTKYHHVTQLKAGDSGIVLLARRLFGWHSGSCSQIF
FT                   VVRGNHEGKLYEARRXVTLTMTHKMIHY"
XX
SQ   Sequence 927 BP; 252 A; 231 C; 264 G; 179 T; 1 other;

jq361117 Length: 927  25-APR-2012  Type: N  Check: 1734  ..

       1  gcctcattca tggtcggatc gatccttgtg gacaccgcaa gcgtcctgaa
      51  agagagcttt gcacagaaag tgctcacaac acctccagtg ttggtagcac
     101  agcctgtgca gaggggcttt ggtgcggcac ggatgtgtgc acgcaaagca
     151  attgcagatg atgaaaagaa ggtggccaaa gccttcttag ctctggaagc
     201  acggtgtgct gccagggtct cagggatggg aaccatccgc gtgaaagtca
     251  cgcggtctgg aaccttgcgg gcgaagccac tcccaaaaaa ggagcaggca
     301  cgtcttagga aggctgagcg taaggcacgc ttggatcatg aagagtttct
     351  gaaaggaagc cccactgtca ttggtcacat cagcatagct ggtggcgcgc
     401  agccttcaca ggacatggtg gagccaatgt ccacacgaaa ggcaccatgg
     451  cattcagtga gcaagagagc tcgaaaagca atcccgcgct ccccaacact
     501  gaatgaaact ggactcgcat cattgatgca agccatcgca aagattgggg
     551  ccaagaattc catgaaaatt gaaatcgtgg ataagcgaag ggtgcaagca
     601  cgctacataa agcgtgatgc agggtcatac ctgcaagtgc gcgtcgcgca
     651  ccatgagggc ctaaggcgta ggcgtgactt gaaactctct gcatttgcag
     701  accaatgctt aacacaactc gtacgcacca cccacgggac gaagtaccac
     751  cacgtaaccc agcttaaagc gggtgacagt gggatcgttc tgttagcacg
     801  cagactcttt gggtggcaca gcggtagttg tagccaaatt ttcgtcgtgc
     851  gtgggaatca tgaaggcaag ttgtatgagg cacggcgcar ggtgactcta
     901  actatgacac acaagatgat ccactac