Sequence of DPV Soybean mosaic virus

Soybean mosaic virus isolate 14SBA.3-1 nonfunctional capsid protein gene, partial sequence.

ACC No: JQ361522

Dated: 2013-01-31 | Length: 798 | CRC: -1337039894

                
ID   JQ361522; SV 1; linear; genomic RNA; STD; VRL; 798 BP.
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AC   JQ361522;
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DT   31-JAN-2013 (Rel. 115, Created)
DT   31-JAN-2013 (Rel. 115, Last updated, Version 1)
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DE   Soybean mosaic virus isolate 14SBA.3-1 nonfunctional capsid protein gene,
DE   partial sequence.
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KW   .
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OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-798
RA   Oliveros O.A., Gordillo L.A.;
RT   "Incidence and diversity of Soybean Mosaic virus on Passiflora edulis
RT   Sims";
RL   Unpublished.
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RN   [2]
RP   1-798
RA   Oliveros O.A., Gordillo L.A.;
RT   ;
RL   Submitted (04-JAN-2012) to the INSDC.
RL   Agronomy, Universidad Nacional de Colombia, AV 45 No 26-85, Bogota 0000,
RL   Colombia
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .798
FT                   /organism="Soybean mosaic virus"
FT                   /host="Passiflora edulis"
FT                   /isolate="14SBA.3-1"
FT                   /mol_type="genomic RNA"
FT                   /country="Colombia"
FT                   /collection_date="01-Nov-2011"
FT                   /db_xref="taxon:12222"
FT   misc_feature    <1. .798
FT                   /note="nonfunctional capsid protein due to mutation"
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SQ   Sequence 798 BP; 260 A; 141 C; 210 G; 187 T; 0 other;

jq361522 Length: 798  31-JAN-2013  Type: N  Check: 9379  ..

       1  tcaggcaagg acaaggaaga agatgtggat gcaggtaagg attcaaagaa
      51  gagcaccagt agtagcaagg gaactggcac aagcagcaaa gatgtaaatg
     101  ttggatcaaa gggaaaggtg gttccgcgtt tgcggaagat tacagggaag
     151  atgaatcttc caatggttgg aggaaagatc attctcagtt tggaccactc
     201  gcttgagtac aaacctaatc aggttgattt attcaacacc cgagcaacaa
     251  aaacacagtt cgaagtgtgg tacaatgcag ttaaagatga atatgagctt
     301  gacgatgagc agatgggtgt ggttatgaat ggtttcatgg tatggtgcat
     351  tgacaatggc acatctccag acgctaatgg cgtgtgggtg atgatggatg
     401  gaaaggaaca gattgaatat ccgctgtaac ccattgtcga aaatgcaaac
     451  ccaactttga gacaaatcat gcaccatttc tcagatgcag cagaagctta
     501  cattgagatg agaaattctg aaagtctgta tatgcctaga tatggactac
     551  tgaggaattt gagagataga gagctagctc gctatgcttt tgatttttat
     601  gaggttactt ctaagacacc aaacagggca agggaagcaa tagcgcagat
     651  gaaggctgca gctctctcgg gagttaacaa caagttgttt ggacttgatg
     701  ggaacatctc aaccaactcc gaaaatactg aaaggcacac tgcaagggat
     751  gtgaatcaat acatgcacac tcttttgggc atgggcccac cgcagtaa