Sequence of DPV Soybean mosaic virus

Soybean mosaic virus isolate 13SBA.8 capsid protein gene, partial cds.

ACC No: JQ361525

Dated: 2013-01-31 | Length: 798 | CRC: -1939889272

                
ID   JQ361525; SV 1; linear; genomic RNA; STD; VRL; 798 BP.
XX
AC   JQ361525;
XX
DT   31-JAN-2013 (Rel. 115, Created)
DT   31-JAN-2013 (Rel. 115, Last updated, Version 1)
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DE   Soybean mosaic virus isolate 13SBA.8 capsid protein gene, partial cds.
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KW   .
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-798
RA   Oliveros O.A., Gordillo L.A.;
RT   "Incidence and diversity of Soybean Mosaic virus on Passiflora edulis
RT   Sims";
RL   Unpublished.
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RN   [2]
RP   1-798
RA   Oliveros O.A., Gordillo L.A.;
RT   ;
RL   Submitted (04-JAN-2012) to the INSDC.
RL   Agronomy, Universidad Nacional de Colombia, AV 45 No 26-85, Bogota 0000,
RL   Colombia
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .798
FT                   /organism="Soybean mosaic virus"
FT                   /host="Passiflora edulis"
FT                   /isolate="13SBA.8"
FT                   /mol_type="genomic RNA"
FT                   /country="Colombia"
FT                   /collection_date="01-Nov-2011"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .798
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /protein_id="AFV80135.1"
FT                   /translation="SGKDKEEDVDAGKDSKKSTSSSKGTGTSSKDVNVGSKGKVVPRLR
FT                   KITGKMNLPMVGGKIILSLDHLLEYKPNQVDLFNTRATKTQFEVWYNAVKDEYELDDEQ
FT                   MGVVMNGFMVWCIDNGTSPDANGVWVMMDGKEQIEYPLKPIVENAKPTLRQIMHHFSDA
FT                   AEAYIEMKNSESLYMPRYGLLRNLRDRELPRYAFDFYEVTSKTPNRAREAITQMKAAAL
FT                   SGVNNKLFGLDGNISTNSENTERRTARDVNQNMHTLLGMGPPQ"
XX
SQ   Sequence 798 BP; 265 A; 140 C; 207 G; 186 T; 0 other;

jq361525 Length: 798  31-JAN-2013  Type: N  Check: 8609  ..

       1  tcaggcaagg acaaggaaga agatgtggat gcaggtaagg attcaaagaa
      51  gagcaccagt agtagcaagg gaactggcac aagcagcaaa gatgtaaatg
     101  ttggatcaaa gggaaaggtg gttccgcgtt tgcggaagat tacagggaag
     151  atgaatcttc caatggttgg aggaaagatc attctcagtt tggaccactt
     201  gcttgagtac aaacctaatc aggttgattt attcaacacc cgagcaacaa
     251  aaacacagtt cgaagtgtgg tacaatgcag ttaaagatga atatgagctt
     301  gacgatgagc agatgggtgt ggttatgaat ggtttcatgg tatggtgcat
     351  tgacaatggc acatctccag acgctaatgg cgtgtgggtg atgatggatg
     401  gaaaggaaca gattgaatat ccgctgaaac ccattgtcga aaatgcaaaa
     451  ccaactttga gacaaatcat gcaccatttc tcagatgcag cagaagctta
     501  cattgagatg aaaaattctg aaagtctgta tatgcctaga tatggactac
     551  tgaggaattt gagagataga gagctacctc gctatgcttt tgatttttat
     601  gaggttactt ctaagacacc aaacagggca agggaagcaa taacgcaaat
     651  gaaggctgca gctctctcgg gagttaacaa caagttgttt ggacttgatg
     701  ggaacatctc aaccaactcc gaaaatactg aaaggcgcac tgcaagggat
     751  gtgaatcaaa acatgcacac tcttttgggc atgggcccac cgcagtaa