Sequence of DPV Soybean mosaic virus

Soybean mosaic virus isolate 76V2.71 capsid protein gene, partial cds.

ACC No: JQ361554

Dated: 2013-01-31 | Length: 798 | CRC: 415058497

                
ID   JQ361554; SV 1; linear; genomic RNA; STD; VRL; 798 BP.
XX
AC   JQ361554;
XX
DT   31-JAN-2013 (Rel. 115, Created)
DT   31-JAN-2013 (Rel. 115, Last updated, Version 1)
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DE   Soybean mosaic virus isolate 76V2.71 capsid protein gene, partial cds.
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KW   .
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-798
RA   Oliveros O.A., Gordillo L.A.;
RT   "Incidence and diversity of Soybean Mosaic virus on Passiflora edulis
RT   Sims";
RL   Unpublished.
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RN   [2]
RP   1-798
RA   Oliveros O.A., Gordillo L.A.;
RT   ;
RL   Submitted (04-JAN-2012) to the INSDC.
RL   Agronomy, Universidad Nacional de Colombia, AV 45 No 26-85, Bogota 0000,
RL   Colombia
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .798
FT                   /organism="Soybean mosaic virus"
FT                   /host="Passiflora edulis"
FT                   /isolate="76V2.71"
FT                   /mol_type="genomic RNA"
FT                   /country="Colombia"
FT                   /collection_date="01-Nov-2011"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .798
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /protein_id="AFV80160.1"
FT                   /translation="SGKDKEEDVDAGNESKKSTSSSKGVGTSSKDVNVGSKGRVVPRLQ
FT                   KITGKMNLPMVGGKIILSLDHLLEYKPNQVDLFNTRATKTQFEVWYNAVKDEYELDDEQ
FT                   MGVVMNGFMVWCIDNGTSPDANGVWVMMDGKEQIEYPLKPIVENAKPTLRQIMHHFSDA
FT                   AEAYIEMRNSESLYMPRYGLLRNLRDRELARYAFDFYEVTSKTPNRAREAIAQMKAAAL
FT                   SGVNNKLFGLDGNISTNSENTERHTARDVNQNMHTLLGMGPPQ"
XX
SQ   Sequence 798 BP; 263 A; 137 C; 210 G; 188 T; 0 other;

jq361554 Length: 798  31-JAN-2013  Type: N  Check: 8341  ..

       1  tcaggcaagg acaaggaaga agatgtggat gcaggtaatg agtcaaagaa
      51  gagcaccagt agtagtaagg gagttggcac aagcagcaaa gatgtaaatg
     101  ttggatcaaa gggaagggtg gttccgcgtt tgcagaagat tacagggaag
     151  atgaatcttc caatggttgg agggaagatc attctcagtt tggaccactt
     201  gcttgagtac aaacctaatc aggttgattt attcaacact cgagcaacaa
     251  aaacacagtt cgaagtgtgg tacaatgcag tcaaagatga atacgagctt
     301  gacgatgaac agatgggtgt ggttatgaat ggtttcatgg tatggtgtat
     351  tgacaatggc acatctccag atgctaatgg cgtgtgggtg atgatggatg
     401  gaaaggaaca gattgaatat ccgctgaaac ccattgtcga aaatgcaaaa
     451  ccaactttga gacaaattat gcaccatttc tcagatgcag cagaggctta
     501  cattgaaatg agaaattccg aaagtctgta tatgcctaga tatggactac
     551  tgaggaattt gagagataga gagctagctc gctatgcttt tgacttctat
     601  gaggttactt ctaaaacacc aaacagggca agggaagcaa tagcgcagat
     651  gaaggctgca gctctctcgg gagttaacaa caagttgttt ggacttgatg
     701  ggaacatctc aaccaattcc gaaaatactg aaaggcacac tgcaagggat
     751  gtgaatcaaa acatgcacac tcttttgggc atgggcccac cgcagtaa