Sequence of DPV Soybean mosaic virus

Soybean mosaic virus isolate 1V1.3 P1 gene, partial cds.

ACC No: JQ361571

Dated: 2013-01-31 | Length: 924 | CRC: -668192121

                
ID   JQ361571; SV 1; linear; genomic RNA; STD; VRL; 924 BP.
XX
AC   JQ361571;
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DT   31-JAN-2013 (Rel. 115, Created)
DT   31-JAN-2013 (Rel. 115, Last updated, Version 1)
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DE   Soybean mosaic virus isolate 1V1.3 P1 gene, partial cds.
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KW   .
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OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-924
RA   Oliveros O.A., Gordillo L.A.;
RT   "Incidence and diversity of Soybean Mosaic virus on Passiflora edulis
RT   Sims";
RL   Unpublished.
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RN   [2]
RP   1-924
RA   Oliveros O.A., Gordillo L.A.;
RT   ;
RL   Submitted (04-JAN-2012) to the INSDC.
RL   Agronomy, Universidad Nacional de Colombia, AV 45 No 26-85, Bogota 0000,
RL   Colombia
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .924
FT                   /organism="Soybean mosaic virus"
FT                   /host="Passiflora edulis"
FT                   /isolate="1V1.3"
FT                   /mol_type="genomic RNA"
FT                   /country="Colombia"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .>924
FT                   /codon_start=1
FT                   /product="P1"
FT                   /protein_id="AFV80176.1"
FT                   /translation="QMATIMIGSMAISVPNTHVLCASNSVMPVQAVQMAKQVPSARGVF
FT                   YTLKRESSMQVHKYEEAMRKFQEAFDQDVGIQQRLLINKHSPIQSTKNGLTLRHLTLEQ
FT                   AQAKEAAIARQKQEEEDFLNGKYEQQFYPGVPDTKSMKFEGGSVGFRTKYWRPTPKKTK
FT                   ERRATPQCRKPTYVLEEVLSIASKSGKPFEFITGKRKKVEVRYARKHGAILPKFSLPHE
FT                   EGKYIHQELQYASIYEFLPYICKFAKYKSINADDITYGDSGLLFDERSSLTTNHTKLPY
FT                   FVVRGRRNGELVNALEVAENMADIQHY"
XX
SQ   Sequence 924 BP; 305 A; 178 C; 219 G; 222 T; 0 other;

jq361571 Length: 924  31-JAN-2013  Type: N  Check: 9476  ..

       1  caaatggcaa caatcatgat tggaagcatg gcgatttctg tgccaaacac
      51  tcacgtcttg tgcgcatcga attctgtgat gccggttcaa gcagttcaga
     101  tggcaaaaca agtgccttct gctcgagggg tgttctacac acttaagaga
     151  gagagcagca tgcaagtgca taagtatgag gaggcaatgc gcaaatttca
     201  agaagcattt gaccaagatg ttggcattca gcaaaggctt ctaataaaca
     251  agcatagtcc catacaatcc acaaagaatg gtttgacctt gcgtcactta
     301  actttagagc aggctcaagc aaaagaagcg gcgattgcaa ggcaaaagca
     351  agaagaggaa gactttctca atgggaagta tgaacagcaa ttttaccctg
     401  gtgttcccga tacaaagtcc atgaagtttg aaggagggag cgttgggttc
     451  agaacaaagt actggagacc aactccaaag aagactaaag aaaggcgtgc
     501  aacaccacag tgtaggaaac caacatatgt tttggaggaa gttctttcta
     551  tagcttcaaa gagtggtaag ccatttgaat ttatcacagg aaaaaggaag
     601  aaagtcgaag tccgttacgc gcgtaagcat ggcgcaatat tgcccaagtt
     651  ctccctcccg catgaagaag gcaaatatat ccatcaggaa cttcagtatg
     701  cgagcatata tgaattcctt ccatatattt gcaagtttgc aaaatataag
     751  agcataaatg cggatgatat aacttatgga gatagtggtt tactgtttga
     801  tgagcgatca tctttaacca caaatcacac taagttacca tactttgttg
     851  ttcggggaag gaggaatggg gaactcgtta acgctcttga agtggctgaa
     901  aacatggcgg atattcagca ctac