Sequence of DPV Soybean mosaic virus

Soybean mosaic virus isolate 14SBA1.11 P1 gene, partial cds.

ACC No: JQ361576

Dated: 2013-01-31 | Length: 924 | CRC: -2054940270

                
ID   JQ361576; SV 1; linear; genomic RNA; STD; VRL; 924 BP.
XX
AC   JQ361576;
XX
DT   31-JAN-2013 (Rel. 115, Created)
DT   31-JAN-2013 (Rel. 115, Last updated, Version 1)
XX
DE   Soybean mosaic virus isolate 14SBA1.11 P1 gene, partial cds.
XX
KW   .
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-924
RA   Oliveros O.A., Gordillo L.A.;
RT   "Incidence and diversity of Soybean Mosaic virus on Passiflora edulis
RT   Sims";
RL   Unpublished.
XX
RN   [2]
RP   1-924
RA   Oliveros O.A., Gordillo L.A.;
RT   ;
RL   Submitted (04-JAN-2012) to the INSDC.
RL   Agronomy, Universidad Nacional de Colombia, AV 45 No 26-85, Bogota 0000,
RL   Colombia
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .924
FT                   /organism="Soybean mosaic virus"
FT                   /host="Passiflora edulis"
FT                   /isolate="14SBA1.11"
FT                   /mol_type="genomic RNA"
FT                   /country="Colombia"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .>924
FT                   /codon_start=1
FT                   /product="P1"
FT                   /protein_id="AFV80181.1"
FT                   /translation="QMATIMIGSMAISEPNTHVSCASNSVMPVQAVQVAKQVPSARGVF
FT                   YTLKRESSMQVHKYEEAMRKFQEAFDQDVGIQQRLLINKHSPIQSTKNGLTLRRLTLEQ
FT                   ARAKEAAITKQKQEEEDFLNGKYEQQFYAGVSATESMKFEGGSVGFRTKYWRPTPKKTK
FT                   ERRATPQCRKPTYVLEKVLSIASKSGKPVEFITGKRKRVKVCYARKHGAILPKFSLPHE
FT                   EGKYIHQELQYASTYEFLPYICKFAKYKSINADDITYGDSGLLFDERSSLTTNHTKLPY
FT                   FVVRGRRNGKLVNALEVVENMEDIQHY"
XX
SQ   Sequence 924 BP; 304 A; 176 C; 222 G; 222 T; 0 other;

jq361576 Length: 924  31-JAN-2013  Type: N  Check: 9867  ..

       1  caaatggcaa caatcatgat tggaagcatg gcgatttcag agccaaacac
      51  tcacgtctcg tgcgcatcga attctgtgat gccggttcaa gcagttcagg
     101  tggcaaaaca agtgccttct gctcgagggg tgttctacac acttaagaga
     151  gagagcagca tgcaagtgca taagtatgag gaggcaatgc gcaaatttca
     201  agaagcattc gaccaagatg ttggcattca gcaaaggctt ctaataaaca
     251  agcatagtcc catacaatcc acaaagaatg gtttgacctt gcgtcgctta
     301  actttagagc aggctcgagc aaaagaagcg gcaattacaa agcaaaagca
     351  agaagaggaa gactttctca atgggaagta tgaacagcaa ttttacgctg
     401  gtgtttccgc tacagagtcc atgaagtttg aaggagggag tgttgggttc
     451  agaacgaagt actggagacc aactccaaag aagactaaag aaaggcgtgc
     501  aacaccacag tgtaggaaac caacatatgt tttggagaaa gttctttcta
     551  tagcttcaaa gagtggtaag ccagttgaat ttatcacagg caaaaggaag
     601  agagtcaaag tctgttacgc gcgtaagcat ggcgcaatat tgcccaagtt
     651  ctccctcccg catgaagaag gcaaatatat ccatcaggag cttcagtatg
     701  caagcacata tgaatttctt ccatatattt gcaagtttgc aaaatataag
     751  agcataaatg cggatgatat aacttatgga gatagtggtt tactgtttga
     801  tgagcgatca tctttaacca caaatcacac taagttaccg tactttgttg
     851  ttcggggtag aaggaatggg aagctcgtta acgctcttga agtggttgaa
     901  aacatggagg atattcagca ctac