Sequence of DPV Groundnut bud necrosis virus

Groundnut bud necrosis virus isolate GBNV-[Vmm1-Knp] non-structural movement protein (NSm) gene, complete cds.

ACC No: JQ366075

Dated: 2012-04-22 | Length: 924 | CRC: 2115661143

                
ID   JQ366075; SV 1; linear; genomic RNA; STD; VRL; 924 BP.
XX
AC   JQ366075;
XX
DT   22-APR-2012 (Rel. 112, Created)
DT   22-APR-2012 (Rel. 112, Last updated, Version 1)
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DE   Groundnut bud necrosis virus isolate GBNV-[Vmm1-Knp] non-structural
DE   movement protein (NSm) gene, complete cds.
XX
KW   .
XX
OS   Groundnut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN   [1]
RP   1-924
RA   Akram M., Naimuddin;
RT   "First report of Groundnut bud necrosis virus causing disease in wild Vigna
RT   mungo var. mungo in India";
RL   Unpublished.
XX
RN   [2]
RP   1-924
RA   Akram M., Naimuddin;
RT   ;
RL   Submitted (09-JAN-2012) to the INSDC.
RL   Division of Crop Protection, Indian Institute of Pulses Research,
RL   Kalyanpur, Kanpur, UP 208024, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .924
FT                   /organism="Groundnut bud necrosis virus"
FT                   /segment="M"
FT                   /host="wild Vigna mungo var. mungo (accession no.
FT                   IC-251383)"
FT                   /isolate="GBNV-[Vmm1-Knp]"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /isolation_source="leaves"
FT                   /collection_date="Sep-2011"
FT                   /note="serogroup: IV; PCR_primers=fwd_name: RKJ5, rev_name:
FT                   RKJ6"
FT                   /db_xref="taxon:198612"
FT   gene            1. .924
FT                   /gene="NSm"
FT   CDS             1. .924
FT                   /codon_start=1
FT                   /gene="NSm"
FT                   /product="non-structural movement protein"
FT                   /protein_id="AFH89618.1"
FT                   /translation="MSRLSNVLESFRPSNSSNKELVPAVKKENNRSILARNVSKKDVDS
FT                   AIMNKAKTLNGKQYVSSGDSSVLGTYSSESAVEATSDDILSRLVVEQSTHLSNWKNDSL
FT                   VGNGNDKVSFTISIMPTWNSNRKYMHISRLIIWVVPTIPDSKNNVKASLIDPNKMTKEE
FT                   KIIISRQASLKDPMCFIFHLNWSFPKERNTPKQCMQLNLTSDEKYAKGVSFASVMYSWV
FT                   KNFCDTPIAAENNTCDVVPINRAKVIQSAALIEACKLMIPKGTGGKQISNQIKSLQKAA
FT                   EKLALEAENDDESLDVDIEMDNLLEI"
XX
SQ   Sequence 924 BP; 327 A; 171 C; 184 G; 242 T; 0 other;

jq366075 Length: 924  22-APR-2012  Type: N  Check: 1647  ..

       1  atgtctcgct tgtctaacgt cttagaatct ttccgtcctt caaacagctc
      51  aaacaaagag ctagtgcctg cagttaaaaa ggaaaacaac agaagcattt
     101  tggcaagaaa tgtttccaaa aaagatgttg acagtgctat catgaacaaa
     151  gcaaaaacat tgaatgggaa acagtatgtt tctagtggag attccagtgt
     201  actgggcaca tactctagtg agtcagctgt ggaagctact tctgatgata
     251  ttctgtccag gcttgttgtt gagcaaagta ctcatctgag taactggaaa
     301  aatgattcac tcgtaggcaa tggaaacgac aaagttagct ttaccataag
     351  cataatgcct acatggaaca gtaacaggaa gtatatgcat atatcaaggc
     401  ttataatctg ggttgtgcca actatccctg attcaaaaaa caatgtcaaa
     451  gcctccttaa ttgatccaaa caaaatgacc aaagaggaga agataattat
     501  cagcagacaa gcctcattga aggatcctat gtgttttatt ttccatctaa
     551  actggtcatt cccaaaagag agaaatactc caaaacaatg catgcagctc
     601  aacttaacca gtgatgaaaa atatgccaaa ggagtcagct ttgcttcagt
     651  catgtattca tgggttaaga acttctgcga tactcctata gctgctgaaa
     701  ataacacatg tgatgtagtt cccattaaca gagctaaggt cattcaatct
     751  gctgctctaa ttgaagcatg caaattaatg atacctaaag gaactggagg
     801  gaaacagata tccaatcaaa tcaagagtct gcagaaagct gccgaaaagc
     851  tggcattaga agctgaaaat gatgatgaga gcctagatgt cgatattgag
     901  atggataatc ttcttgaaat ataa