Sequence of DPV Groundnut bud necrosis virus

Groundnut bud necrosis virus isolate GBNV-[Vum1-Knp] nucleocapsid protein (NP) gene, complete cds.

ACC No: JQ406582

Dated: 2012-04-24 | Length: 831 | CRC: 261794936

                
ID   JQ406582; SV 1; linear; genomic RNA; STD; VRL; 831 BP.
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AC   JQ406582;
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DT   24-APR-2012 (Rel. 112, Created)
DT   24-APR-2012 (Rel. 112, Last updated, Version 1)
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DE   Groundnut bud necrosis virus isolate GBNV-[Vum1-Knp] nucleocapsid protein
DE   (NP) gene, complete cds.
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KW   .
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OS   Groundnut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-831
RA   Akram M., Naimuddin;
RT   "Natural infection of Groundnut bud necrosis virus isolates in wild Vigna
RT   species/sub-species and their NP gene sequence variability within a field";
RL   Unpublished.
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RN   [2]
RP   1-831
RA   Akram M., Naimuddin;
RT   ;
RL   Submitted (12-JAN-2012) to the INSDC.
RL   Division of Crop Protection, Indian Institute of Pulses Research,
RL   Kalyanpur, Kanpur, UP 208024, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Groundnut bud necrosis virus"
FT                   /segment="S RNA"
FT                   /host="Vigna umbellata"
FT                   /isolate="GBNV-[Vum1-Knp]"
FT                   /serotype="WSMoV"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /isolation_source="leaves of wild Vigna umbellata
FT                   (IC-251442)"
FT                   /collection_date="Sep-2011"
FT                   /note="serogroup: IV"
FT                   /db_xref="taxon:198612"
FT   gene            1. .831
FT                   /gene="NP"
FT   CDS             1. .831
FT                   /codon_start=1
FT                   /gene="NP"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AFI25030.1"
FT                   /translation="MSNVKQLTEKKIKELLAGGSADVEIETEDSTPGFSFKAFYDANKT
FT                   LEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM
FT                   ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKAGPSLEL"
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SQ   Sequence 831 BP; 273 A; 147 C; 177 G; 234 T; 0 other;

jq406582 Length: 831  24-APR-2012  Type: N  Check: 2048  ..

       1  atgtctaacg ttaagcagct caccgagaag aaaatcaaag aacttttggc
      51  tggtggctct gcagatgttg aaattgaaac agaagattcc actcccggat
     101  ttagctttaa agctttctat gacgctaaca aaactctcga aataactttc
     151  acaaactgtt tgaatatttt gaagtgcagg aagcagatct ttgctgcttg
     201  taaaagtggt aagtatgttt tttgtggtaa aactattgtt gccacaaata
     251  ctgacgtagg gccagatgac tggaccttca aaaggacaga agctttcatc
     301  aggaccaaaa tggctagtat ggttgaaaag agcaagaatg atgctgccaa
     351  gcaggagatg tacaataaaa taatggaatt accattagtg gcagcttatg
     401  gattaaatgt ccctgcatct ttcgatacat gtgctttaag gatgatgctc
     451  tgcattggag gtcctctgcc tcttttgtct agcatgacag gtctggcacc
     501  aattatattc cctctggctt attatcaaaa tgtgaagaaa gagaaattag
     551  gaattaagaa cttttctact tatgaacagg tttgcaaagt agccaaagta
     601  ctttctgctt cacagattga attcaaaaat gaactagagg aaatgttcaa
     651  atcagctgta aagctattga gtgagagcaa ccctggaaca gccagctcta
     701  tctcactcaa gaaatatgat gaacaagtca aatacatgga caaagctttc
     751  agtgccagtc tctcaatgga tgattatggt gaacattcta agaagaagag
     801  ttcaaaggct ggtccttcgc tggaattgta a