Sequence of DPV Tomato yellow spot virus
Leonurus mosaic virus isolate PR 88 segment DNA-A, complete sequence.
ACC No: JQ429791
Dated: 2013-06-04 | Length: 2652 | CRC: 937439023
ID JQ429791; SV 1; circular; genomic DNA; STD; VRL; 2652 BP.
XX
AC JQ429791;
XX
DT 28-MAY-2012 (Rel. 112, Created)
DT 04-JUN-2013 (Rel. 117, Last updated, Version 2)
XX
DE Leonurus mosaic virus isolate PR 88 segment DNA-A, complete sequence.
XX
KW .
XX
OS Leonurus mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2652
RA Fonseca M.E.N., Boiteux L.S., Fernandes-Acioli N.A.N., Costa A.F.,
RA Kitajima E.W.;
RT "Complete genome sequence of Leonurus-infecting begomovirus from Brazil and
RT Paraguay and its genetic relationship with Tomato yellow spot virus";
RL Unpublished.
XX
RN [2]
RP 1-2652
RA Fonseca M.E.N., Boiteux L.S., Fernandes-Acioli N.A.N., Costa A.F.,
RA Kitajima E.W.;
RT ;
RL Submitted (20-JAN-2012) to the INSDC.
RL Plant Genetics and Plant Breeding, Embrapa Vegetable Crops, Km 09
RL Brasilia-Goiania, Brasilia, DF 70359-970, Brazil
XX
FH Key Location/Qualifiers
FH
FT source 1. .2652
FT /organism="Leonurus mosaic virus"
FT /segment="DNA-A"
FT /host="Leonurus sibiricus (Lamiaceae)"
FT /isolate="PR 88"
FT /mol_type="genomic DNA"
FT /country="Brazil"
FT /collection_date="Mar-2008"
FT /db_xref="taxon:58177"
FT CDS 252. .1007
FT /codon_start=1
FT /product="coat protein"
FT /db_xref="GOA:I3RU54"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:I3RU54"
FT /protein_id="AFK29900.1"
FT /translation="MPKRDPSWRPMVGTTKVSRTSNFSPRGGIGPKFNKASEWVNRPMY
FT RKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDITRGNGITHRVGKRF
FT CVKSVYILGKVWMDENIKLKNHTNSCMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT KNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL
FT LLYMACTHASNPVYATLKIRIYFYDSITN"
FT CDS complement(1004. .1402)
FT /codon_start=1
FT /product="Ren"
FT /db_xref="GOA:I3RU56"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:I3RU56"
FT /protein_id="AFK29902.1"
FT /translation="MDSRTGELITVPQAENGVYIWEISNPLYFKIYLVEDLMYTTTRVY
FT HIQIRFNHNLRRALDLHKAFLNFQVWTTSLTASGTTYLNRFRHLVMLYLDRLGVITINN
FT VIRAVRFATDRSYVNHVLENHSIKFKIY"
FT CDS complement(1149. .1538)
FT /codon_start=1
FT /product="Trap"
FT /db_xref="GOA:I3RU55"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:I3RU55"
FT /protein_id="AFK29901.1"
FT /translation="MLNSSSSTPPSIKPQHRAAKRRGTRRRRIDLQCGCSIYVHISCSN
FT YGFTHRGTHHCASGREWRLYLGDIKSPVFQDLPSRGLNVHNDQSVPHPDTVQPQPQESV
FT GSPQGIPELPSLDDISDSFWNDLFE"
FT misc_feature complement(1459. .2475)
FT /note="similar to Rep"
XX
SQ Sequence 2652 BP; 677 A; 590 C; 609 G; 776 T; 0 other;
jq429791 Length: 2652 04-JUN-2013 Type: N Check: 3377 ..
1 accggatggc cgcccgattt ttgccccccc tgacgtggcg ctctggtgac
51 cgcccgatcc catctcactc gctctagtgg agttcctatg cttttgtggt
101 cccctcttgt aattcaaatt aaagtattta actgttgtcc gaccaatcat
151 agtgagtctg aggagcttag atatctgtgt taatacgtgg tccctaagtt
201 ttattgcccc tataaaacta aagcaagcct gacgtcagtc tttaattcga
251 aatgcctaag cgggatccct catggcgccc aatggttggg accacaaagg
301 ttagccgcac ttccaatttc tctcctcgtg gaggtatagg cccaaaattc
351 aacaaggcct ctgaatgggt taataggccc atgtatagga agcccaggat
401 atatcgtacg ctcagaacgc ccgatgttcc tagaggctgt gaagggccct
451 gtaaggtcca gtcctacgag caacgtcacg atatctccca tgttgggaag
501 gttatgtgta tatccgatat tactcgcggc aacggtatta ctcaccgtgt
551 cggtaagcgt ttctgtgtta agtccgtgta tatattaggc aaggtatgga
601 tggacgagaa tatcaagctc aagaaccaca cgaacagttg catgttctgg
651 ttggtcaggg accgaagacc ctatggaacg ccaatggatt ttggccaggt
701 gttcaacatg tttgacaacg agcccagtac tgcaaccgtg aagaacgatc
751 tccgtgatcg tttccaggtc atgcacaagt tctatgccaa ggtcaccggt
801 ggacagtatg ccagcaatga gcaggcgctg gtcaagcggt tctggaaggt
851 caacaaccat gtggtctaca atcaccaaga ggctggcaag tacgagaatc
901 acacggagaa cgcattatta ttgtatatgg catgtactca tgcatctaac
951 cctgtgtatg cgacgctgaa gattcgaatc tatttttacg attcgatcac
1001 gaattaataa attttgaatt ttattgaatg attttccagt acatgattta
1051 cataagatct gtctgtcgca aaacgaacag ctctaattac attgtttatc
1101 gtaataacgc ctaatcgatc taaatacaac atgactaaat gtctaaacct
1151 attcaaataa gtcgttccag aagctgtcag agatgtcgtc cagacttgga
1201 agttcaggaa tgccttgtgg agatccaacg ctctcctgag gttgtggttg
1251 aaccgtatct ggatgtggta cactctggtc gttgtgtaca ttaagtcctc
1301 tactaggtag atcttgaaat acaggggatt tgatatctcc cagatataaa
1351 cgccattctc tgcctgaggc acagtgatga gttccccggt gcgtgaatcc
1401 atagttgctg cagctgatgt ggacgtatat ggagcaccca cactgtagat
1451 ctatccttct acggcgagtt cctcttctct tcgccgctct gtgttgtggt
1501 ttgatagagg ggggagtcga tgaagatgaa tttagcattg tgtagtgtcc
1551 acgattttaa agctgcattc tcttctttgt cgaggaaatc tttataactg
1601 actccctccc caggattgca aagcacgatt gatgggatgc caactgtaat
1651 ttggactggc tttccgtatt tgcaatttga ctgccagtct ttttgagcac
1701 caatcaattc cttccagtgt tttaacttta gatagtgcgg tgcgacatca
1751 tcaatgacgt tatactccac ttcgttcgag aaaacctttg agttgaagtc
1801 cagatggcca ctcaagtaat tatgtgggcc taatgaacga gcccacatcg
1851 tcttccctgt ccttgaatca ccttcgacta tcaaactctt aggtctcaat
1901 ggccgcgcag cggaacctct cccgaaatac tcatcggccc actcttgcat
1951 ctcgtcggga acgttagtga aggaggagag gggaaacgga ggaacatatg
2001 gctccggagc ctttgagaaa attctatcca aattagaatt taaattatga
2051 aattgaaaaa gatatctctc cggcaacttc tctttaatta tttgaagagc
2101 cgttcgttta tccggagcat ttaacgcctc agctgcagcg tcattagccg
2151 tctgctgacc tcctctagca cttcgtccgt cgacctgaaa ttccccccat
2201 tccactgtat ctccgtcctt gtcgatgtag gacttgacgt cggacgatga
2251 tttagctccc tgaatgttcg gatggaaatg tgctgacctt gtttgggata
2301 ccaggtcgaa tagtctttga tttgtgattt ggactttccc ttccaattgc
2351 agcaaatgtg gaggtgaggt tgcccatctt cgtgaagctc tctgcaatct
2401 tgatgaattt cttatttgat ggtaattgaa tagtttgcaa ttgggaaagt
2451 gcttcctccc tttgtaagag tacattgtgg ataagtaagg aaaatgtttt
2501 tcgcttgcac tctaaaacga cgtggtttgg atggcatttt tgtaaataaa
2551 ggggtgtaca ccaattgaga gctcgctcat aagtccttat gaattggagt
2601 atggagtgca atatatagta ataggagttt ctaaggccat ccgtataata
2651 tt