Sequence of DPV Culex Y virus
Culex Y virus isolate P1-BS2010 segment A, complete sequence.
ACC No: JQ659254
Dated: 2012-10-24 | Length: 3429 | CRC: -1868345322
ID JQ659254; SV 1; linear; genomic RNA; STD; VRL; 3429 BP.
XX
AC JQ659254;
XX
DT 12-SEP-2012 (Rel. 114, Created)
DT 24-OCT-2012 (Rel. 114, Last updated, Version 2)
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DE Culex Y virus isolate P1-BS2010 segment A, complete sequence.
XX
KW .
XX
OS Culex Y virus
OC Viruses; dsRNA viruses; Birnaviridae.
XX
RN [1]
RP 1-3429
RX PUBMED; 22875257.
RA Marklewitz M., Gloza-Rausch F., Kurth A., Kummerer B.M., Drosten C.,
RA Junglen S.;
RT "First isolation of an Entomobirnavirus from free-living insects";
RL J. Gen. Virol. 93(PT 11):2431-2435(2012).
XX
RN [2]
RP 1-3429
RA Junglen S., Marklewitz M., Kurth A., Gloza-Rausch F., Drosten C.;
RT ;
RL Submitted (10-FEB-2012) to the INSDC.
RL Institut of Virology, University of Bonn Medical Centre, Sigmund Freud-Str.
RL 25, Bonn, Nordrhein-Westfalen 53127, Germany
XX
FH Key Location/Qualifiers
FH
FT source 1. .3429
FT /organism="Culex Y virus"
FT /segment="A"
FT /host="Culex pipiens complex"
FT /isolate="P1-BS2010"
FT /mol_type="genomic RNA"
FT /country="Germany"
FT /collection_date="Mar-2010"
FT /db_xref="taxon:1230254"
FT CDS 104. .3277
FT /codon_start=1
FT /product="polyprotein precursor"
FT /note="encodes VP2, VP3, and VP4"
FT /protein_id="AFR34026.1"
FT /translation="MKMNTSNEYLKTLLDPTQFIADIPDDIMIRHINRSETITYNLKTG
FT ASGTGLIVFYPNTPSSVAGFHYRWDAENSVWAFDQYIYTAQELKKSYDYGRLISGAVSV
FT KSSSIPSGVYALTGTFNAVWFQGTLSEVSDLNYDRILSITSNPLDKVGNVLVGDGLAVL
FT SLPQGFNNPYVRLGDESPSSLTSVTHITNTSQNLGYGGAFAVPQTTVAGQGTFFKEFNI
FT NVDSVGPIDVTWSGLMTMQDEWTVTANYQPLNLSGTLIQGSMRTIIWSNVGVSNGSHYM
FT NLNEINVSFFHENPPPEPVAAIKVHITFGNNTNGESTMNVDGSFTFHVVGGATIGVNSP
FT TVMIGYQGVASGSTITLSGVNNYELVPNPALQKNLPMSYGTCDPTDLNYVKYILSNREK
FT LGIRSVMTLAQYAKMKMQMNIMTDYHVDDREASSFDFWHLLKQIKKLVVPVASTMLPQF
FT APIIGAADNLANAVLGNSASGQPIGNSASGLPISMTRRIKSAHSADTPIGDSNWEPTRN
FT PEFNKLDVIYDVSHSSMALFPVIMMDNDQVVPSDPEELFIAVSLTESLRKQIPGIDTMP
FT YYTIGGHRVYNAVSNGRVSTAPFLTSDYILLPCYQLFDGKLATSKTPNKVTGTSHQLAL
FT YAAEGLQKRGIMGKAPYAAFTGSVAGQSVGEVFGISLKSQLTDSLGIPLFGNSQGLKPI
FT QNLHQLERLLGISGDVPRRTPRETPNHWTASSASVPFSNTNPFLNGEVDQERNVQFLPT
FT NTNPFLDAGQDVGGVPPQQMARIISDDTRNAFLEDGQSIPSSQEKIVTVHEFLLQNQEL
FT LEAMFGLISRGHEKALVNMVTKAALNIKTQAKELTEERLARLEVKVQNLARQGIVLDPE
FT NVKRAGRITQEDTQAAISRSKDHQMRNKLRRVFLNNVSIGREYTEDEFVDFWIRQGFIP
FT NGLQISAWLREEDWSSPTPALSKRHYDSYLQMLGPSPDQGLVEQVRSMVDSVYDENGNK
FT GPSQDQARALSSSVRRLISQSLVTRPQPVPKVPVRKIAPIATGQGSNPERRAALERLQR
FT ARGGESEMI"
XX
SQ Sequence 3429 BP; 950 A; 895 C; 830 G; 754 T; 0 other;
jq659254 Length: 3429 24-OCT-2012 Type: N Check: 5555 ..
1 aaaataattg gcggccgacc aggccgaccc agttgatgag taagggatac
51 tcagttgcag catgaacttc ccaaaaaccc ttttgaaacc tattacatga
101 ttgatgaaaa tgaatacctc aaacgaatac ctcaagaccc tgttggaccc
151 aacccaattc atcgccgaca tccctgacga cataatgatt cgccacatta
201 accgctcgga gacaatcacc tacaacctta agacaggtgc atcaggcacc
251 ggtttgattg tcttctaccc aaacacccca tccagcgttg ctgggttcca
301 ttacaggtgg gacgctgaaa actcggtgtg ggcgttcgac caatacatat
351 acactgcaca ggagctaaag aagtcctatg attatggacg actcatctca
401 ggagcagtga gtgtcaagtc gagttccata ccatcaggcg tctacgccct
451 tactggaacc ttcaacgctg tatggtttca gggtacactt agtgaagtct
501 cagacctaaa ctacgatcgg atcctatcga taacctccaa tcctttggac
551 aaggtaggca atgttctggt tggtgacggt ctggccgtac taagcctgcc
601 acagggcttt aataacccct acgtcaggct tggcgacgag tcaccctcgt
651 cactaaccag cgtaacccac atcacaaaca cttcccagaa ccttggctat
701 gggggggctt tcgcagttcc tcaaaccacg gttgcgggtc aaggaacgtt
751 ttttaaagag ttcaacatta acgttgactc cgtcgggccg atcgatgtaa
801 catggtcggg actgatgaca atgcaagacg agtggactgt aactgctaac
851 tatcagcctc tgaacctatc aggaacgctg attcagggca gcatgcggac
901 cattatctgg tccaatgttg gcgtctccaa cggatcccac tacatgaacc
951 ttaatgaaat aaacgtctca ttctttcatg agaatcctcc tcccgaaccg
1001 gtagcagcta tcaaagtgca tatcactttt ggcaacaaca cgaacgggga
1051 gagcaccatg aatgttgacg ggtctttcac ctttcatgtt gtgggtgggg
1101 ccaccatcgg cgtcaattca cccacagtta tgattgggta ccagggagta
1151 gctagtggct ccactattac ccttagtgga gtcaacaact atgagctggt
1201 gccaaaccct gctcttcaga agaatctacc aatgtcttac ggaacgtgtg
1251 accctacaga ccttaactat gtcaagtaca tcctgtcaaa tcgggaaaaa
1301 ctaggtatca ggtccgtaat gacactagca caatacgcga agatgaagat
1351 gcagatgaac atcatgacgg actaccatgt ggatgatcgt gaggcctcca
1401 gcttcgactt ctggcacctg ctaaagcaga tcaaaaagct tgttgtccct
1451 gttgcgtcga ccatgctacc ccagttcgct cctattatag gggctgctga
1501 caacctggcc aacgcagtac tgggcaacag tgccagtggg caaccaattg
1551 ggaactcagc gagtggacta ccaatatcca tgacaaggag gatcaagagt
1601 gcacactcag ctgacacccc aataggtgat agcaactggg agcccaccag
1651 gaatcccgag ttcaacaagc ttgatgtaat ttatgatgtg tcacattcat
1701 ccatggcttt gtttcccgtt ataatgatgg acaacgacca ggtcgtccca
1751 tctgatcctg aggagctgtt cattgctgtt tcactaacgg aatccctcag
1801 gaagcagatc cccggcattg acaccatgcc ctactacacc ataggaggac
1851 atcgtgtcta caatgccgtt tcaaatggtc gggtgtccac cgctcctttt
1901 ttaacaagcg actacatcct cctaccgtgc tatcaactat tcgacggaaa
1951 gctggcaacc tccaaaacac cgaacaaggt gaccggcacg tcacaccagc
2001 ttgcattgta tgcagccgaa gggctacaaa aacgtggcat tatggggaag
2051 gctccatatg ccgctttcac aggctccgtt gcaggacagt cagtgggaga
2101 agtttttggc atcagcctga aatcccaatt gacggactcc cttgggattc
2151 ctctatttgg gaactcacaa ggattgaagc caatccaaaa cctacaccag
2201 ttggagaggc ttctaggcat ctcaggggac gttccaagaa gaaccccccg
2251 agagactcca aaccactgga ctgcaagctc cgccagcgtg cctttctcaa
2301 acacaaatcc attcttgaat ggcgaagtgg accaagaaag gaatgtacag
2351 ttcctaccaa caaataccaa cccgtttctg gacgctgggc aagatgttgg
2401 aggagttcca ccacagcaaa tggcgagaat catctcagac gacacccgca
2451 atgcttttct agaggatggc caatccatcc caagctctca ggagaagata
2501 gtcacggttc acgaattcct actacagaac caggagcttc tagaggcaat
2551 gttcgggctc atcagccgag gccacgaaaa agctctggtg aacatggtta
2601 ccaaggccgc tttgaacatc aaaacgcagg ccaaagagct aacagaggaa
2651 agactggctc ggctcgaggt gaaggtccaa aatcttgcaa ggcaagggat
2701 tgtacttgac ccagagaatg tgaagagagc agggaggatt acacaagagg
2751 atacacaagc agcgatcagt agatccaaag accatcagat gagaaacaag
2801 ctccggagag tcttccttaa caacgtgtca atcgggcgcg aatacacaga
2851 ggatgagttt gtagactttt ggattcgaca gggatttatt cctaatggtc
2901 tccagatatc tgcatggcta agggaggagg actggtcaag ccctactcct
2951 gcactgtcga agaggcatta cgacagttac ctgcagatgc ttggcccaag
3001 ccctgaccag gggctagtcg agcaggtcag gtctatggtt gacagtgtgt
3051 atgacgaaaa cggaaacaaa gggccttccc aggaccaggc cagggcgctg
3101 tctagttcgg ttaggagact catctcccaa tcgcttgtca ctagacctca
3151 gcccgtgccc aaggtcccgg tgaggaaaat agcaccaatc gccactggcc
3201 agggatctaa cccggaaagg cgggccgcgc tcgagagact acagagagcg
3251 cgcggtggag aatcagagat gatctgattc aatgtttggg taattccctc
3301 acatcacagc cccctggcta ggggtaaggg gttttatggt atagctgtac
3351 ctatgcccta gtcgctcgac tatagaagtc acttggtctc attagccaag
3401 agaacctgcc atcgaaagca gggcggcgt