Sequence of DPV Culex Y virus
Culex Y virus isolate P1-BS2010 segment B, complete sequence.
ACC No: JQ659255
Dated: 2012-10-24 | Length: 3254 | CRC: -916304231
ID JQ659255; SV 1; linear; genomic RNA; STD; VRL; 3254 BP.
XX
AC JQ659255;
XX
DT 12-SEP-2012 (Rel. 114, Created)
DT 24-OCT-2012 (Rel. 114, Last updated, Version 2)
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DE Culex Y virus isolate P1-BS2010 segment B, complete sequence.
XX
KW .
XX
OS Culex Y virus
OC Viruses; dsRNA viruses; Birnaviridae.
XX
RN [1]
RP 1-3254
RX PUBMED; 22875257.
RA Marklewitz M., Gloza-Rausch F., Kurth A., Kummerer B.M., Drosten C.,
RA Junglen S.;
RT "First isolation of an Entomobirnavirus from free-living insects";
RL J. Gen. Virol. 93(PT 11):2431-2435(2012).
XX
RN [2]
RP 1-3254
RA Junglen S., Marklewitz M., Kurth A., Gloza-Rausch F., Drosten C.;
RT ;
RL Submitted (10-FEB-2012) to the INSDC.
RL Institut of Virology, University of Bonn Medical Centre, Sigmund Freud-Str.
RL 25, Bonn, Nordrhein-Westfalen 53127, Germany
XX
FH Key Location/Qualifiers
FH
FT source 1. .3254
FT /organism="Culex Y virus"
FT /segment="B"
FT /host="Culex pipiens complex"
FT /isolate="P1-BS2010"
FT /mol_type="genomic RNA"
FT /country="Germany"
FT /collection_date="Mar-2010"
FT /db_xref="taxon:1230254"
FT CDS 111. .3107
FT /codon_start=1
FT /product="VP1"
FT /note="RNA-dependent RNA-polymerase"
FT /protein_id="AFR34027.1"
FT /translation="MSDIFNQQGLKSKFSSILKSENQESNDILVVFNSFSDISLDTAED
FT IEYTDLGSALLEHSVKVFRPKPYDELINVPFTEAASPRMLDLYEEQLGSKDVSLPIGAG
FT QILPTYKPGHEITPPLTTLANSLAFEYMKYLEGSSNPEFDSAIYRTIKELLEIQGATRF
FT STGSLLGQVKRIAAGQDVAYGRNGHHKNKSFRELGLTPYKVMSWLDEYMPIGEGEPDFK
FT LTNTLDWLVYTPQEAELMGVPDSLPAITHSSAAGLPWLGKKKGEVAISALITANMLIKD
FT TSRILKETLFSGSNDPLEAKREGVAAETAKSKTRSAGQFSSEILKMITTEYSYTMMGLL
FT FPKGERYHRADHLEKTRNIWSASYVTHLLGSIISDQPAKRMLNVLTSSEPTPSLSKFSP
FT TQGGMDALVNRILEATDITELVYADNAYMYFPREDVWYSIDLTKGEANCTRDIAMTTAM
FT YLLTRGWTSNEGVPLYNYTWAYLALYMIPYTTVDSISILKNFQIKNPGQGSGNPWTFLN
FT NHVLTTILMNKWRAMGRPKPTAQVIEKLSSETGIDFKVELVVPEFKKKLLEAREHSLPV
FT EDRIRPRTIVSMDMLGWDVTHTQYGFTPVLAKERLFKSIACPQPPSSTFSSHIAKQVHR
FT YIQNVALLYVGGWAYPCIAQTIEGYALNHWNTIDSMLRNNPNYDLEKALTKAVDTSPFR
FT EVMELINIRKPMHEQNYASVLYTPKDRPRVQPKRMMSSPFLIRKDENVAQYTRRMAKIR
FT QENDMVGEEWAPIKGLISRLFAREALGENLKLRENFSKGKIRELMTSIEQQLKERGMGM
FT EVWHKAYQTSSPPEGLKGYLAQLLVSLTPPWTKSLPREVFRRLLGYDPIGSGSTPELTS
FT DEKYYYNVQSLEHNRIEYLRKLNEDDISIYANKYMVYSSTLLSTMLPEKVEWPEQRSMK
FT VQDAMNPFMVKGFKNKDMKPRFGEEILEEEQLQAKKSSTEKRRMQRKGQKLKLQRQAAD
FT GKFVVQRLN"
XX
SQ Sequence 3254 BP; 1012 A; 747 C; 793 G; 702 T; 0 other;
jq659255 Length: 3254 24-OCT-2012 Type: N Check: 1471 ..
1 aaaataattg gcggccgaca aggccgaccg attgcgtgag gagatgcgac
51 atacacgcga agaaaagcag catccaacct aacaacaaga cgacccaaat
101 cttccaaaac atgagtgaca tattcaacca gcagggactc aagtccaagt
151 tctcaagtat cctcaaaagc gaaaaccaag aaagcaatga cattctggtt
201 gtcttcaatt cattttccga tattagtttg gatactgctg aggacatcga
251 atacactgat ctcgggagcg cactacttga gcactcggtg aaagtcttta
301 gacccaagcc ctatgatgag ctaattaatg ttccattcac agaggcagca
351 tctcctagga tgctggacct gtatgaggaa cagcttgggt ctaaagatgt
401 gagtctcccg attggggccg gacaaatact acccacatac aagcccggcc
451 atgagataac acctcctctg acaaccttgg ccaactcctt ggctttcgag
501 tatatgaagt acttagaggg ctcatcaaac ccagagtttg attcagccat
551 ttacagaact atcaaagaac tgctcgaaat ccagggtgca acaaggttct
601 ccactggctc actgctaggc caggtgaaga ggatagcggc cgggcaagat
651 gtggcatacg gccgtaatgg tcaccataag aacaagagtt ttagggagct
701 aggactgaca ccatacaagg tcatgagctg gcttgacgag tatatgccta
751 taggggaggg ggaacctgat ttcaaactga cgaacactct agattggctc
801 gtatatacgc cacaagaggc agagttgatg ggtgttccag attcactacc
851 agctataacg cattcctcgg cagctggatt gccctggttg ggtaagaaga
901 aaggtgaagt tgcaatatca gctctcatta ctgcaaacat gctgatcaag
951 gacacatcgc ggattctaaa ggaaactcta ttctcgggct ccaatgaccc
1001 tttggaggct aagagggaag gagttgctgc ggagaccgcg aagagtaaaa
1051 cgcgatcagc gggtcaattt tcatctgaaa tactgaaaat gattaccacg
1101 gagtactctt acacgatgat gggtctgttg ttcccaaaag gagagaggta
1151 tcacagagct gaccacttgg aaaaaactag gaacatttgg agtgcaagct
1201 atgtgacgca tctattggga tcaattatct cggaccaacc agcaaagcgc
1251 atgctcaatg ttctcacttc tagcgaacct accccatccc tatcaaagtt
1301 ttctccaact caagggggga tggatgctct tgttaatcgc attctcgaag
1351 ccaccgacat cacagaactg gtgtatgcag ataacgccta tatgtacttc
1401 cctagagagg atgtctggta tagtatagac ctcaccaagg gtgaagccaa
1451 ctgtaccagg gacattgcaa tgacaacagc aatgtacttg ctaactaggg
1501 ggtggacgag caacgaaggg gtaccactat acaactatac gtgggcttac
1551 ctggccctct atatgatacc ctacacaact gtggactcta taagcatttt
1601 gaagaacttc cagattaaaa atccaggtca ggggagtggc aacccatgga
1651 ctttcctaaa caatcatgta ttgacaacca tactaatgaa caagtggaga
1701 gccatgggcc gaccaaaacc tacagcccag gttattgaga agctttcctc
1751 agaaactggt atagacttca aagttgagct agtggtgcct gaattcaaga
1801 agaaactact ggaggcaagg gagcactcgc tccctgttga ggataggatt
1851 aggcctagaa cgattgtttc catggacatg ttggggtggg atgtaacaca
1901 cactcagtat ggtttcaccc cagtcttggc aaaggaacga ttgtttaagt
1951 caatagcctg cccacaacct cctagtagca ccttcagctc ccacatagcc
2001 aaacaagtcc acaggtacat acagaacgtc gcactgttat acgtgggtgg
2051 gtgggcatac ccctgtatag cccagaccat cgaaggatac gccctgaacc
2101 attggaacac aattgattct atgcttcgaa acaaccctaa ttatgaccta
2151 gagaaagcct taacgaaggc tgttgacacg agcccattcc gtgaggtcat
2201 ggagttaatt aacatcagga aaccaatgca cgagcaaaat tatgcatcgg
2251 tcctatacac accaaaagac aggccgcgcg tgcaaccaaa gaggatgatg
2301 tcaagcccgt ttctcatccg aaaggatgaa aatgtggcgc agtacacacg
2351 caggatggca aagatccggc aggagaatga catggttggt gaagaatggg
2401 ctccaataaa ggggttgata tctcggcttt tcgcacggga agccctgggt
2451 gagaacctta aactcaggga aaacttctcc aagggtaaga tacgagagct
2501 aatgaccagc atagagcaac aattgaagga gagggggatg gggatggaag
2551 tttggcacaa agcataccag acatcttcac cccctgaagg tctcaaaggg
2601 tatctggctc aactgctagt ttccttaaca ccaccctgga ccaagtctct
2651 cccaagagag gtgtttagga ggctgctggg atatgatcca ataggttcag
2701 ggagcacccc agagctcaca agtgatgaaa aatactacta taatgtccaa
2751 agtctggaac acaatagaat agaataccta cggaagctta acgaggatga
2801 catctccatt tatgccaaca agtacatggt gtacagcagc acactacttt
2851 ccacaatgtt gccagagaag gtggaatggc ctgaacagag atccatgaag
2901 gttcaagatg ccatgaaccc attcatggtc aaaggcttca agaacaaaga
2951 catgaagcca aggtttggag aggaaatatt agaagaagaa caactccaag
3001 ccaaaaagtc atctaccgag aaacggagaa tgcaaaggaa ggggcaaaaa
3051 ctgaagctgc agagacaagc tgcagacgga aagttcgtcg tgcaaaggtt
3101 gaactgacaa aaccccggga gggggggagt tgaatctcgg taatggtaga
3151 cccaccagcc tctggtttga gacccaggct cctttgccac tagactaaac
3201 gaaagtcggt cactctcatc aggtgacaga tccctaattt aaataggggt
3251 ggct